| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0148 |
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| Symbol | |
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| ID | 6972218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 157222 |
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| End bp | 159822 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643384225 |
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| Product | putative outer membrane usher protein |
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| Protein accession | YP_002268748 |
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| Protein GI | 209396258 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.234756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACCAGT TTACTCATCA AAAAAGCCGT ATCCCGAAAA AAACGCTACT TGCGGCCTGT
TGTGCCCTGT TTTATAGCAG CAACGGTGCT GCGGCGGACA CCGTGGAATA TGACAGTTCC
TTTTTAATGG GAACTGGCGC ATCAACGATT GATGTTAAAC GTTATGCTCA AGGCAACCCG
ACACCGCCGG GTCTCTATAA TGTCCGCGTA TTTGTAAACG GTCAGGCGAC TTCCAGCTTA
GAAATTCCGT TTGTGGATAT TGGCGAAAAC AGTGCGGCGG CCTGTCTTAC CCATAAAAAC
CTGGCGCAAC TTCACATTAA GCAACCTGAA CAGCCTGTCA CTTTACTCGC CAGAGAAGGT
GAAGAAGAGG ATTGTCTGGA TCTGGCAAAG TCATACGAAA AGGCGGATGT GTGCTTTGAC
GGTAGTGACC AGTTTCTCGA TCTGACGATC CCTCAGGCCT ATGTTCTGAA AAGCTATGGC
GGCTACGTTG ACCCTTCTTT ATGGGAATCG GGAATTAACG CTGCCACACT GGCATATACC
CTGAACGCGT ATCACACAAG TTCAGATAAC GACAATAGTG ACAGCGTCTA TGGCGCGTTC
AACTCAGGTA TCAATTTAGG AGCCTGGCAC TTTCGTGCGC GCGGTAACTA TAACTGGACA
ACAGATAACG GCAGCGATTT CGATTTCCAG GATCGTTACT TACAGCGTGA CATTCCGGCA
ATCCGTTCCC AGATAATTAT GGGTGATGCC TATACCACCG GTGAAACGTT TGACTCTGTC
AACGTCCGTG GTGTTCGCCT GTACAGCGAC AGCCGTATGC TGCCTTCGGC GCTGGCCAGT
TACGCTCCGA CCATCCGCGG TGTAGCAAAC TCCAACGCCA AAGTCACCGT GACGCAAAGC
GGATATAAAA TTTATGAAAC CACCGTTCCG CCCGGTGAAT TTGTTATAGA CGACATTAGC
CCTTCCGGCT TTGGTAGCGA ACTGGTCGTG ACCATTGAAG AAGCGGATGG TTCCAAACGC
ACCTTTACGC AACCCTTCTC GTCGGTTGTA CAAATGCAAC GTCCTGGTGT GGGCCGTTGG
GATTTCAGCG CGGGTAAAGT CATTGATGAC AGTCTGCGAT CCGAACCCAA TATGGGGCAA
GCCTCTTATT ACTATGGTCT GAATAACCTC TTCACGGGTT ATACCGGCAT TCAGTTCACC
GATAATAACT ATCTTGCCGG GCTGTTAGGT GTGGGTATCA ACACCAGCAT CGGCGCCTTT
GCGGTAGACG TTACCCATTC CCGTGCTGAA ATTCCGGATG ATAAAACCTA CCAGGGGCAA
AGTTATCGCG TGACCTGGAA CAAACTTTTC CAGGATACCG GGACATCATT TAACCTCGCG
GCGTACCGCT ATTCCACCCA GGATTACCTG GGCCTGCATG ATGCGTTAGT CCTCATTGAC
GACGCCAAGC ATTTGTCTGC CGATGAAGAC AAAAACACCA TGCAGACGTA CTCACGTATG
AAAAACCAGT TTACCGTCAG CATTAACCAG CCATTGAATA TCGCCTATGA AGATTACGGT
TCGCTGTTTA TTTCCGGTAG CTGGACGTAT TACTGGGCGG CGAACAATAG CCGCACTGAA
TATAATGTTG GTTACAGTAA AAGCGTTTCG TGGGGCAGTT TCAGCGTCAA CCTACAACGT
AGCTGGAATG AAGACGGCGA GAAAGATGAC GCGATGTACG TCAGCGTTAG CGTACCTATT
GAGAATATTT TAGGTGGCAA ACGTAAGTCT TCTGGTTTCC GCAATTTAAA TACTCAGCTC
AATACCGATT TCGATGGTTC ACATCAGTTG AATGTTAACA GTTCCGGTAA CACTGAAAAC
AATCTGGTGA ACTACAGTGT CAACGCAGGT TATAGCCTCG ATAAAAACGC CGGCGATTTA
GCCTCTGTTG GTGGTTATCT CAACTATGAA TCTGGGTTAG GCGGTATTTC CGCTTCGGCC
TCGGCCACTT CTGATAACAG CCAACAGTAC TCCATCTCAA CCGATGGCGG CTTTGTATTA
CACAGTGGTG GTTTAACGTT CACTAACAAC AGTTTCAGCA GTAACGACAC GCTGGTGTTA
ATCAACGCCC TAGGTGCTAA AGGCGCACGA ATCAATAACA GTAATAACGA AATCGATCGC
TGGGGATATG CCGTGACGTC CTCTGTCAGC CCATATCGTG AAAACCGGGT AGGTCTGAAC
ATTGAAACAC TGGAAAACGA TGTTGAACTG AAAAGTACCA GCGCCACCAC CGTACCACGT
AGCGGCTCCG TTGTTTTGAC CCGTTTCGAA ACTGACGAGG GGCGTTCTGC CGTGCTGAAT
ATTACTGCCG CCAATGGCAA ATCCATTCCG TTTGCTGCGG AGGTTTACCA GGGTGAGGTG
ATGATCGGCA GCATGGGCCA GGGTGGTCAG GCATTTGTAC GCGGTATTAA CGACAGCGGG
GAATTAATCG TGCGCTGGTA TGAAAACAAC CAAACCATTG ACTGTAAGTT GCACTACCAG
TTCCCGGCGC AGCCACAAAC GCAGGGAAGC ACCAACACCT TATTACTTAA CAATCTTACC
TGTCAGGTAG CAAATCACTA A
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| Protein sequence | MYQFTHQKSR IPKKTLLAAC CALFYSSNGA AADTVEYDSS FLMGTGASTI DVKRYAQGNP
TPPGLYNVRV FVNGQATSSL EIPFVDIGEN SAAACLTHKN LAQLHIKQPE QPVTLLAREG
EEEDCLDLAK SYEKADVCFD GSDQFLDLTI PQAYVLKSYG GYVDPSLWES GINAATLAYT
LNAYHTSSDN DNSDSVYGAF NSGINLGAWH FRARGNYNWT TDNGSDFDFQ DRYLQRDIPA
IRSQIIMGDA YTTGETFDSV NVRGVRLYSD SRMLPSALAS YAPTIRGVAN SNAKVTVTQS
GYKIYETTVP PGEFVIDDIS PSGFGSELVV TIEEADGSKR TFTQPFSSVV QMQRPGVGRW
DFSAGKVIDD SLRSEPNMGQ ASYYYGLNNL FTGYTGIQFT DNNYLAGLLG VGINTSIGAF
AVDVTHSRAE IPDDKTYQGQ SYRVTWNKLF QDTGTSFNLA AYRYSTQDYL GLHDALVLID
DAKHLSADED KNTMQTYSRM KNQFTVSINQ PLNIAYEDYG SLFISGSWTY YWAANNSRTE
YNVGYSKSVS WGSFSVNLQR SWNEDGEKDD AMYVSVSVPI ENILGGKRKS SGFRNLNTQL
NTDFDGSHQL NVNSSGNTEN NLVNYSVNAG YSLDKNAGDL ASVGGYLNYE SGLGGISASA
SATSDNSQQY SISTDGGFVL HSGGLTFTNN SFSSNDTLVL INALGAKGAR INNSNNEIDR
WGYAVTSSVS PYRENRVGLN IETLENDVEL KSTSATTVPR SGSVVLTRFE TDEGRSAVLN
ITAANGKSIP FAAEVYQGEV MIGSMGQGGQ AFVRGINDSG ELIVRWYENN QTIDCKLHYQ
FPAQPQTQGS TNTLLLNNLT CQVANH
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