Gene ECH74115_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0136 
Symbol 
ID6970202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp148055 
End bp148825 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID643384213 
ProductABC transporter, permease protein 
Protein accessionYP_002268736 
Protein GI209396497 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATC TTTACTGGGT GGCGCTAAAA AGCATCTGGG CGAAAGAGAT CCATCGCTTT 
ATGCGTATCT GGGTGCAGAC GCTGGTGCCG CCAGTCATCA CCATGACCCT TTACTTTATT
ATTTTCGGTA ACCTGATTGG TTCGCGTATT GGCGATATGC ATGGCTTCAG CTACATGCAG
TTCATCGTAC CGGGGCTGAT CATGATGTCG GTGATCACCA ACGCCTACGC CAACGTCGCG
TCATCATTTT TTGGTGCCAA GTTCCAGCGT AATATTGAAG AGCTGCTGGT AGCGCCGGTT
CCGACTCACG TCATTATTGC CGGATATGTC GGCGGTGGCG TGGCGCGTGG TCTGTTTGTT
GGCATTCTGG TGACGGCAAT TTCACTGTTT TTTGTGCCGT TTCAGGTGCA TTCGTGGGTA
TTCGTTGCCT TAACCCTGGT GCTCACGGCG GTGTTGTTCT CCCTTGCGGG TTTGCTGAAC
GGTGTGTTTG CCAAAACGTT CGATGACATC AGCCTGGTGC CAACCTTTGT GTTAACGCCA
CTCACGTATT TGGGTGGGGT CTTTTACTCA CTGACTTTGT TGCCGCCGTT CTGGCAAGGG
CTGTCGCACC TGAACCCAAT CGTTTATATG ATCAGTGGTT TCCGCTACGG CTTCCTCGGT
ATCAATGATG TTCCGCTGGT CACTACCTTT GGCGTACTGG TGGTCTTTAT TGTGGCGTTT
TATTTGATCT GTTGGTCGCT GATCCAACGT GGACGTGGTT TGCGTAGCTA A
 
Protein sequence
MMHLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GDMHGFSYMQ 
FIVPGLIMMS VITNAYANVA SSFFGAKFQR NIEELLVAPV PTHVIIAGYV GGGVARGLFV
GILVTAISLF FVPFQVHSWV FVALTLVLTA VLFSLAGLLN GVFAKTFDDI SLVPTFVLTP
LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG INDVPLVTTF GVLVVFIVAF
YLICWSLIQR GRGLRS