| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0123 |
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| Symbol | lpdA |
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| ID | 6970367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 132202 |
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| End bp | 133689 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643384200 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002268723 |
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| Protein GI | 209397520 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00461139 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAATG GGCGTCATAA AAAAAACGTC AGACCCGCCG GAGATAAATA TATAGAGGTC
ATGATGAGTA CTGAAATCAA AACTCAGGTC GTGGTACTTG GGGCAGGCCC CGCAGGTTAC
TCCGCTGCCT TCCGTTGCGC TGATTTAGGT CTGGAAACCG TAATCGTAGA ACGTTACAAC
ACCCTTGGCG GTGTTTGCCT GAACGTCGGC TGTATCCCTT CTAAAGCACT GCTGCACGTA
GCAAAAGTTA TCGAAGAAGC CAAAGCGCTG GCTGAACACG GTATCGTCTT CGGCGAACCG
AAAACCGATA TCGACAAGAT TCGTACCTGG AAAGAGAAAG TGATCAATCA GCTGACCGGT
GGTCTGGCTG GTATGGCGAA AGGCCGCAAA GTCAAAGTGG TCAACGGTCT GGGTAAATTT
ACCGGGGCTA ACACCCTGGA AGTTGAAGGT GAGAACGGTA AAACCGTGAT CAACTTCGAC
AACGCGATCA TTGCAGCGGG TTCTCGCCCG ATTCAACTGC CGTTTATTCC GCATGAAGAT
CCGCGTATCT GGGACTCTAC TGACGCGCTG GAACTGAAAG AAGTACCAGA ACGCCTGCTG
GTAATGGGTG GCGGTATCAT CGGTCTGGAA ATGGGCACCG TTTACCACGC GCTGGGTTCA
CAGATTGACG TGGTTGAAAT GTTCGACCAG GTTATCCCGG CAGCTGACAA AGACATCGTT
AAAGTCTTCA CCAAGCGTAT CAGCAAGAAA TTCAACCTGA TGCTGGAAAC CAAAGTTACC
GCCGTTGAAG CGAAAGAAGA CGGTATTTAT GTGACGATGG AAGGCAAAAA AGCACCAGCT
GAACCGCAGC GTTACGACGC CGTGCTGGTA GCGATTGGTC GTGTGCCGAA CGGTAAAAAC
CTCGACGCAG GCAAAGCTGG CGTGGAAGTT GACGACCGTG GTTTCATCCG CGTTGACAAA
CAGCTGCGTA CCAACGTACC GCACATCTTT GCTATCGGCG ATATCGTCGG TCAGCCGATG
CTGGCACACA AAGGTGTTCA CGAAGGTCAC GTTGCCGCTG AAGTTATCGC CGGTAAGAAA
CACTACTTCG ATCCGAAAGT TATCCCGTCC ATCGCCTATA CCGAACCAGA AGTTGCATGG
GTAGGTCTGA CTGAGAAAGA AGCGAAAGAG AAAGGCATCA GCTATGAAAC CGCCACCTTC
CCGTGGGCTG CTTCTGGTCG TGCTATCGCT TCCGACTGCG CAGACGGTAT GACCAAGCTG
ATTTTCGACA AAGAATCTCA CCGTGTGATC GGTGGTGCGA TTGTCGGTAC TAACGGCGGC
GAGCTGCTGG GTGAAATCGG CCTGGCAATT GAAATGGGTT GTGATGCTGA AGACATCGCA
CTGACCATCC ACGCGCACCC GACTCTGCAC GAGTCTGTGG GCCTGGCGGC AGAAGTGTTC
GAAGGTAGCA TTACTGACCT GCCGAACCCG AAAGCGAAGA AGAAGTAA
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| Protein sequence | MDNGRHKKNV RPAGDKYIEV MMSTEIKTQV VVLGAGPAGY SAAFRCADLG LETVIVERYN
TLGGVCLNVG CIPSKALLHV AKVIEEAKAL AEHGIVFGEP KTDIDKIRTW KEKVINQLTG
GLAGMAKGRK VKVVNGLGKF TGANTLEVEG ENGKTVINFD NAIIAAGSRP IQLPFIPHED
PRIWDSTDAL ELKEVPERLL VMGGGIIGLE MGTVYHALGS QIDVVEMFDQ VIPAADKDIV
KVFTKRISKK FNLMLETKVT AVEAKEDGIY VTMEGKKAPA EPQRYDAVLV AIGRVPNGKN
LDAGKAGVEV DDRGFIRVDK QLRTNVPHIF AIGDIVGQPM LAHKGVHEGH VAAEVIAGKK
HYFDPKVIPS IAYTEPEVAW VGLTEKEAKE KGISYETATF PWAASGRAIA SDCADGMTKL
IFDKESHRVI GGAIVGTNGG ELLGEIGLAI EMGCDAEDIA LTIHAHPTLH ESVGLAAEVF
EGSITDLPNP KAKKK
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