Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0117 |
Symbol | ampE |
ID | 6967256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 123751 |
End bp | 124605 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643384194 |
Product | regulatory protein AmpE |
Protein accession | YP_002268717 |
Protein GI | 209399026 |
COG category | [V] Defense mechanisms |
COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0149146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAT TTACAACCTT ACTGGTGTTA ATTTTCGAGC GCCTGTTTAA GTTGGGCGAG CACTGGCAGC TTGATCATCG TCTTGAAGCG TTCTTTCGGC GGGTGAAACA TTTTTCTCTC GGGCGCACGT TAGGCATGAC CATTATTGCG ATGGGCGTGA CTTTTTTACT GTTACGCGCA TTGCAGGGAG TATTGTTCAA CGTTCCCACG CTGCTGGTGT GGCTGCTGAT TGGTTTGCTG TGTATTGGCG CAGGTAAAGT TCGTCTTCAT TATCATGCTT ATCTGACAGC TGCTTCACGT AATGATAGCC ATGCCCGTGC CACGATGGCT GGCGAACTCA CCATGATTCA CGGCGTCCCG GCAGGCTGCG ACGAACGTGA GTATTTGCGT GAGCTGCAAA ATGCATTGCT GTGGATTAAC TTTCGTTTTT ATCTTGCACC GCTGTTCTGG CTGATTGTGG GGGGAACCTG GGGACCCGTT ACGCTGATGG GGTATGCGTT TTTGCGTGCA TGGCAATACT GGCTGGCGCG ATACCAGACG CCGCATCATC GTTTACAGTC CGGCATTGAT GCAGTGCTTC ATGTACTGGA TTGGGTGCCG GTTCGTCTTG CAGGTGTGGT ATATGCCTTG ATCGGTCATG GTGAGAAAGC GTTACCGGCC TGGTTTGCTT CGCTGGGTGA TTTCCGTACT TCGCAATATC AGGTATTAAC GCGTCTGGCG CAGTTCTCTC TGGCGCGTGA ACCGCATGTC GATAAGGTGG AGACGCCGAA GGCAGCGGTT TCAATGGCGA AGAAAACCTC GTTCGTGGTC GTGGTGGTGA TTGCGCTACT GACGATTTAC GGGGCGTTGG TGTAA
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Protein sequence | MTLFTTLLVL IFERLFKLGE HWQLDHRLEA FFRRVKHFSL GRTLGMTIIA MGVTFLLLRA LQGVLFNVPT LLVWLLIGLL CIGAGKVRLH YHAYLTAASR NDSHARATMA GELTMIHGVP AGCDEREYLR ELQNALLWIN FRFYLAPLFW LIVGGTWGPV TLMGYAFLRA WQYWLARYQT PHHRLQSGID AVLHVLDWVP VRLAGVVYAL IGHGEKALPA WFASLGDFRT SQYQVLTRLA QFSLAREPHV DKVETPKAAV SMAKKTSFVV VVVIALLTIY GALV
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