| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0115 |
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| Symbol | nadC |
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| ID | 6966878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 122222 |
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| End bp | 123115 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384192 |
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| Product | quinolinate phosphoribosyltransferase |
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| Protein accession | YP_002268715 |
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| Protein GI | 209398277 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00122879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCCTC GCCGCTATAA CCCTGACACC CGACGTGACG AGCTGCTGGA ACGCATTAAT
CTCGATATCC CCGGCGCGGT GGCCCAGGCG CTGCGGGAAG ATTTAGGCGG AACAGTCGAT
GCCAACAATG ACATTACGGC AAAACTTTTA CCGGAAAATT CTCGCTCTCA TGCCACGGTG
ATCACCCGCG AGAATGGCGT ATTTTGCGGC AAACGCTGGG TTGAAGAGGT GTTTATTCAA
CTGGCAGGCG ACGATGTCAC CATAATCTGG CATGTGGATG ACGGCGATGT CATCAACGCC
AATCAACCCT TGTTCGAACT TGAAGGCCCA TCCCGCGTGC TGTTAACGGG CGAACGCACT
GCGCTTAATT TTGTGCAAAC CCTTTCAGGA GTTGCCAGTA AGGTACGCCA CTATGTCGAA
TTACTGGAAG GCACCAACAC GCAGTTGTTG GATACGCGTA AAACCTTACC CGGTCTGCGT
TCAGCGCTGA AATACGCGGT ACTTTGCGGC GGCGGAGCGA ATCACCGTCT GGGGCTTTCT
GATGCCTTCC TGATCAAAGA AAACCATATT ATTGCCTCCG GCTCAGTGCG CCAGGCGGTC
GAAAAAGCGT CCTGGCTGCA CCCGGATGCG CCAGTAGAAG TCGAAGTAGA GAATCTGGAA
GAACTTGATG AAGCCCTGAA AGCAGGAGCC GATATCATCA TGCTGGATAA CTTCGAAACA
GAACAGATGC GCGAAGCCGT CAAACGCACC AACGGCAAGG CGCTACTGGA AGTGTCTGGC
AACGTCACTG ACAAAACACT GCGCGAATTT GCCGAAACGG GCGTGGACTT TATCTCCGTC
GGTGCGCTAA CTAAGCACGT ACAGGCACTC GACCTTTCAA TGCGTTTTCG CTAG
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| Protein sequence | MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD ANNDITAKLL PENSRSHATV
ITRENGVFCG KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQPLFELEGP SRVLLTGERT
ALNFVQTLSG VASKVRHYVE LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS
DAFLIKENHI IASGSVRQAV EKASWLHPDA PVEVEVENLE ELDEALKAGA DIIMLDNFET
EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV GALTKHVQAL DLSMRFR
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