Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0114 |
Symbol | pilA |
ID | 6966938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 121579 |
End bp | 122019 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384191 |
Product | putative major pilin subunit |
Protein accession | YP_002268714 |
Protein GI | 209396006 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00878541 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAGC AACGCGGTTT TACACTTATC GAACTGATGG TGGTTATTGG CATCATTGCC ATTTTAAGCG CCATTGGTAT TCCCGCTTAT CAAAACTACC TGCGCAAAGC CGCACTCACC GACATGCTAC AAACCTTTGT GCCTTACCGT ACCGCCGTAG AGTTGTGCGC GCTGGAACAT GGTGGATTAG ATACCTGCGA CGGTGGCAGC AATGGCATTC CCTCGCCTAC CACCACCCGC TATGTTTCAG CCATGAGTGT GGCAAAGGGC GTGGTGTCGC TGACCGGGCA AGAAAGTCTC AATGGGCTAA GCGTCGTCAT GACGCCAGGT TGGGATAACG CAAACGGCGT CACCGGCTGG GCGCGCAACT GCAATATTCA AAGTGACAGC GCATTGCAGC AAGCCTGCGA AGATGTCTTC CGCTTTGATG ACGCCAACTA A
|
Protein sequence | MDKQRGFTLI ELMVVIGIIA ILSAIGIPAY QNYLRKAALT DMLQTFVPYR TAVELCALEH GGLDTCDGGS NGIPSPTTTR YVSAMSVAKG VVSLTGQESL NGLSVVMTPG WDNANGVTGW ARNCNIQSDS ALQQACEDVF RFDDAN
|
| |