| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0112 |
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| Symbol | pilC |
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| ID | 6968931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 118992 |
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| End bp | 120194 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643384189 |
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| Product | type IV pilin biogenesis protein |
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| Protein accession | YP_002268712 |
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| Protein GI | 209397106 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0263524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTA AGCAACTCTG GCGCTGGCAT GGCATAACCG GCGACGGCAA TGCGCAAGAT
GGGATGCTAT GGGCAGAGAG CCGTACTTTA CTGCTTATGG CACTACAGCA ACAGATGGTT
ACCCCACTAA GCCTGAAGCG AATTGCTATC AATTCTGCGC AGTGGCGAGG AGATAAAAGC
GCGGAAGTCA TTCATCAACT GGCGACGCTA CTTAAAGCCG GGTTAACGCT TTCTGAAGGG
CTGGCACTGC TGGCGGAACA GCATCCCAGT AAGCAATGGC AAGCGTTGCT GCAATCTCTG
GCACACGATC TCGAACAGGG CATTGCCTTT TCCAATGCCT TATTACCCTG GTCAGAGGTA
TTTCCGCCGC TCTATCAGGC GATGATCCGC ACGGGTGAAC TGACCGGTAA GCTGGATGAA
TGCTGCTTTG AACTGGCGCG TCAGCAAAGA GCCCAGCGTC AGTTGACCGA CAAAGTAAAA
TCAGCGTTAC GTTATCCCAT CATCATTTTA GCGATGGCAA TCATGGTGGT TGTGGCAATG
CTGCATTTTG TTCTGCCGGA GTTTGCCGCT ATCTATAAGA CCTTCAACAC CCCACTACCG
GCACTAACGC AGGGGATCAT GACGCTGGCA GACTTTAGTG GCGAATGGGG CTGGCTGCTG
GTGTTGTTCG GCATTATGCT GACGATAGCC AATAAGTTGC TGATGCGCCG CCCGACCTGG
CTTATCGCGC GGCAGAAATT GCTGTTACGC ATCCCGATTA TGGGGTCACT GATGCGGGGA
CAAAAACTCA CGCAGATCTT TACGATTCTG GCGCTGACTC AAAGTGCAGG CATTACTTTT
TTACAGGGCG TAGAGAGCGT CAGAGAAACA ATGCGCTGCC CGTACTGGGT GCAACTTCTG
ACACAAATCC AGCACGATAT CAGTAACGGT CATCCCATCT GGCTGGCGTT AAAAAATGCC
GGTGAGTTTA GCCCGCTCTG TTTGCAATTA GTGAGAACGG GAGAGGCCTC CGGCTCGCTG
GATCTCATGT TAGACAACAT CGCCCATCAT CATCGGGATA ACACAATGGC GCTGGCGGAT
AACCTAGCAG CCTTACTGGA ACCGGCGTTG CTGATCATAA CGGGAGGAAT TATCGGTACG
CTGGTGGTGG CGATGTATCT GCCAATTTTC CATTTAGGCG ATGCGATGAG TGGGATGGGA
TAA
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| Protein sequence | MASKQLWRWH GITGDGNAQD GMLWAESRTL LLMALQQQMV TPLSLKRIAI NSAQWRGDKS
AEVIHQLATL LKAGLTLSEG LALLAEQHPS KQWQALLQSL AHDLEQGIAF SNALLPWSEV
FPPLYQAMIR TGELTGKLDE CCFELARQQR AQRQLTDKVK SALRYPIIIL AMAIMVVVAM
LHFVLPEFAA IYKTFNTPLP ALTQGIMTLA DFSGEWGWLL VLFGIMLTIA NKLLMRRPTW
LIARQKLLLR IPIMGSLMRG QKLTQIFTIL ALTQSAGITF LQGVESVRET MRCPYWVQLL
TQIQHDISNG HPIWLALKNA GEFSPLCLQL VRTGEASGSL DLMLDNIAHH HRDNTMALAD
NLAALLEPAL LIITGGIIGT LVVAMYLPIF HLGDAMSGMG
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