| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0106 |
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| Symbol | secA |
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| ID | 6968113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 112865 |
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| End bp | 115570 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643384183 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_002268706 |
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| Protein GI | 209399217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000279351 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATCA AATTATTAAC TAAAGTTTTC GGTAGTCGTA ACGATCGCAC CCTGCGCCGG
ATGCGCAAAG TGGTCAACAT CATCAATGCC ATGGAACCGG AGATGGAAAA ACTCTCCGAC
GAAGAACTGA AAGGGAAAAC CGCAGAGTTT CGTGCACGTC TGGAAAAAGG CGAAGTGCTG
GAAAATCTGA TCCCGGAAGC TTTCGCCGTG GTACGTGAGG CAAGTAAGCG CGTCTTTGGT
ATGCGTCACT TCGACGTTCA GTTACTCGGC GGTATGGTTC TTAACGAACG CTGCATCGCC
GAAATGCGTA CCGGTGAAGG TAAAACCCTG ACCGCAACGC TGCCTGCTTA TCTGAACGCA
CTAACCGGTA AAGGCGTGCA TGTAGTTACC GTCAACGACT ACCTGGCGCA ACGTGACGCC
GAAAACAACC GTCCGCTGTT TGAATTCCTT GGCCTGACTG TCGGTATCAA CCTGCCGGGC
ATGCCAGCAC CGGCAAAGCG CGAAGCTTAC GCAGCTGACA TCACTTACGG TACGAACAAC
GAATACGGCT TTGACTACCT GCGCGACAAT ATGGCGTTCA GCCCTGAAGA ACGTGTACAG
CGTAAACTGC ACTATGCGCT GGTGGACGAA GTGGACTCCA TCCTGATCGA TGAAGCGCGT
ACACCGCTGA TCATTTCCGG CCCGGCAGAA GACAGCTCGG AAATGTATAA ACGCGTGAAT
AAAATTATTC CGCACCTGAT CCGTCAGGAA AAAGAAGACT CCGAAACCTT CCAGGGCGAA
GGCCACTTCT CGGTGGACGA AAAATCTCGC CAGGTGAACC TGACCGAACG TGGTCTGGTG
CTGATTGAAG AACTGCTGGT GAAAGAGGGC ATCATGGATG AAGGGGAGTC TCTGTACTCT
CCGGCCAACA TCATGCTGAT GCACCACGTA ACGGCGGCGC TGCGCGCTCA TGCGCTGTTT
ACCCGTGACG TCGACTACAT CGTTAAAGAT GGTGAAGTTA TCATCGTTGA CGAACACACC
GGTCGTACCA TGCAGGGCCG TCGCTGGTCC GATGGTCTGC ACCAGGCTGT GGAAGCGAAA
GAAGGTGTGC AGATCCAGAA CGAAAACCAA ACGCTGGCTT CGATCACCTT CCAGAACTAC
TTCCGTCTGT ATGAAAAACT GGCGGGGATG ACCGGTACTG CTGATACCGA AGCTTTCGAA
TTTAGCTCCA TCTACAAACT GGATACCGTC GTTGTTCCGA CCAACCGTCC AATGATTCGT
AAAGATCTGC CGGACCTGGT CTACATGACT GAAGCGGAAA AAATTCAGGC GATCATTGAA
GATATCAAAG AACGTACTGC GAAAGGCCAG CCGGTGCTGG TGGGTACTAT CTCCATCGAA
AAATCGGAGC TGGTGTCAAA CGAACTGACC AAAGCCGGTA TTAAGCACAA TGTCCTGAAC
GCCAAATTCC ACGCCAACGA AGCGGCGATT GTTGCTCAGG CAGGTTATCC GGCTGCGGTG
ACTATCGCGA CCAACATGGC GGGTCGTGGT ACAGATATTG TGCTCGGTGG TAGCTGGCAG
GCAGAAGTTG CCGCGCTGGA AAATCCGACC GCAGAGCAAA TTGAAAAAAT TAAAGCCGAC
TGGCAGGTAC GTCACGATGC GGTACTGGCA GCAGGTGGCC TGCATATCAT CGGTACCGAG
CGTCACGAAT CCCGTCGTAT CGATAACCAG TTGCGCGGTC GTTCTGGTCG TCAGGGGGAT
GCTGGTTCTT CCCGTTTCTA CCTGTCGATG GAAGATGCGC TGATGCGTAT TTTTGCTTCC
GACCGAGTAT CCGGCATGAT GCGTAAACTG GGTATGAAGC CAGGCGAAGC CATTGAACAC
CCGTGGGTGA CTAAAGCGAT TGCCAACGCC CAGCGTAAAG TTGAAAGTCG TAACTTCGAC
ATTCGTAAGC AACTGCTGGA ATATGATGAC GTGGCTAACG ATCAGCGTCG CGCCATTTAC
TCCCAGCGTA ACGAATTGCT GGATGTCAGC GATGTGAGCG AAACCATTAA CAGCATTCGT
GAAGATGTGT TCAAAGCGAC CATTGATGCC TACATTCCGC CACAGTCGCT GGAAGAAATG
TGGGATATTC CGGGGCTGCA GGAACGTCTG AAGAACGATT TCGACCTCGA TTTACCAATT
GCTGAGTGGC TGGATAAAGA ACCAGAACTG CATGAAGAGA CGCTGCGTGA GCGCATTCTG
GCGCAGTCCA TCGAAGTGTA TCAGCGTAAA GAAGAAGTGG TTGGTGCTGA GATGATGCGT
CACTTCGAGA AAGGCGTCAT GCTGCAAACG CTTGACTCCC TGTGGAAAGA GCACCTGGCA
GCGATGGACT ATCTGCGTCA GGGTATCCAC CTGCGTGGCT ATGCACAGAA AGATCCGAAG
CAGGAATACA AACGTGAATC GTTCTCCATG TTTGCAGCGA TGCTGGAGTC GTTGAAATAT
GAAGTTATCA GTACGCTGAG CAAAGTTCAG GTACGTATGC CTGAAGAGGT TGAGGAGCTG
GAACAACAGC GTCGTATGGA AGCCGAGCGT TTAGCGCAAA TGCAGCAGCT TAGCCATCAG
GATGACGACT CTGCAGCCGC AGCTGCACTG GCGGCGCAAA CCGGTGAGCG CAAAGTAGGA
CGTAACGATC CTTGCCCGTG CGGTTCTGGT AAAAAATACA AGCAGTGCCA TGGCCGCCTG
CAATAA
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| Protein sequence | MLIKLLTKVF GSRNDRTLRR MRKVVNIINA MEPEMEKLSD EELKGKTAEF RARLEKGEVL
ENLIPEAFAV VREASKRVFG MRHFDVQLLG GMVLNERCIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVVT VNDYLAQRDA ENNRPLFEFL GLTVGINLPG MPAPAKREAY AADITYGTNN
EYGFDYLRDN MAFSPEERVQ RKLHYALVDE VDSILIDEAR TPLIISGPAE DSSEMYKRVN
KIIPHLIRQE KEDSETFQGE GHFSVDEKSR QVNLTERGLV LIEELLVKEG IMDEGESLYS
PANIMLMHHV TAALRAHALF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS DGLHQAVEAK
EGVQIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTV VVPTNRPMIR
KDLPDLVYMT EAEKIQAIIE DIKERTAKGQ PVLVGTISIE KSELVSNELT KAGIKHNVLN
AKFHANEAAI VAQAGYPAAV TIATNMAGRG TDIVLGGSWQ AEVAALENPT AEQIEKIKAD
WQVRHDAVLA AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDALMRIFAS
DRVSGMMRKL GMKPGEAIEH PWVTKAIANA QRKVESRNFD IRKQLLEYDD VANDQRRAIY
SQRNELLDVS DVSETINSIR EDVFKATIDA YIPPQSLEEM WDIPGLQERL KNDFDLDLPI
AEWLDKEPEL HEETLRERIL AQSIEVYQRK EEVVGAEMMR HFEKGVMLQT LDSLWKEHLA
AMDYLRQGIH LRGYAQKDPK QEYKRESFSM FAAMLESLKY EVISTLSKVQ VRMPEEVEEL
EQQRRMEAER LAQMQQLSHQ DDDSAAAAAL AAQTGERKVG RNDPCPCGSG KKYKQCHGRL
Q
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