| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0096 |
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| Symbol | murD |
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| ID | 6969094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 101673 |
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| End bp | 102989 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643384173 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002268696 |
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| Protein GI | 209398858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT ACCAGGGTAA AAATGTTGTC ATTATCGGCC TGGGCCTCAC CGGGCTTTCC
TGCGTGGACT TTTTCCTCGC TCGCGGTGTG ACGCCGCGCG TTATGGATAC GCGTATGACA
CCGCCTGGCC TGGATAAATT ACCCGAAGCC GTAGAACGCC ACACGGGCAG TCTGAATGAT
GAATGGCTGA TGGCGGCAGA TCTGATTGTC GCCAGTCCCG GTATTGCACT GGCGCATCCA
TCCTTAAGCG CTGCCGCTGA TGCCGGAATC GAAATCGTTG GCGATATCGA GCTGTTCTGT
CGCGAAGCAC AAGCACCGAT TGTGGCGATT ACCGGTTCTA ACGGCAAAAG CACGGTCACC
ACGCTAGTGG GTGAAATGGC GAAAGCGGCG GGGGTTAACG TTGGTGTGGG TGGCAATATT
GGCCTGCCCG CGTTGATGCT GCTGGATGAT GAGTGCGAAC TGTACGTACT GGAACTGTCG
AGCTTCCAGC TGGAAACCAC CTCCAGCTTA CAGGCGGTAG CAGCGACCAT TCTGAACGTG
ACTGAAGATC ATATGGATCG CTATCCGTTT GGTTTACAGC AATACCGTGC GGCAAAATTG
CGTATTTACG AAAATGCGAA AGTTTGTGTC GTCAATGCTG ATGATGCCTT AACAATGCCG
ATTCGCGGTG CGGATGAACG CTGCGTCAGC TTTGGCGTCA ACATGGGTGA CTATCACCTG
AATCATCAGC AGGGCGAAAC CTGGCTGCGG GTGAAAGGCG AGAAAGTGCT GAACGTGAAA
GAAATGAAAC TTTCCGGGCA GCATAACTAC ACCAATGCGC TGGCGGCGCT GGCGCTGGCA
GATGCCGCAG GGTTACCGCG TGCCAGCAGC CTGAAAGCGT TAACCACATT CACTGGTCTG
CCGCATCGCT TTGAAGTTGT GCTGGAGCAT AACGGCGTAC GTTGGATTAA CGATTCGAAA
GCGACCAACG TCGGCAGTAC GGAAGCGGCG CTGAATGGCC TGCACGTAGA CGGCACGCTG
CATTTGTTGC TGGGCGGCGA TGGTAAATCG GCGGACTTTA GCCCACTGGC GCGTTACCTG
AATGGCGATA ACGTACGTCT GTATTGTTTC GGTCGTGACG GCGTGCAGCT GGCGGCGCTA
CGCCCGGAAG TGGCAGAACA AACCGAAACT ATGGAACAGG CGATGCGCTT GCTGGCTCCG
CGTGTTCAGC CGGGCGATAT GGTTCTACTC TCCCCGGCCT GTGCCAGCCT TGATCAGTTC
AAGAACTTTG AACAACGAGG CAATGAGTTT GCCCGTCTGG CGAAGGAGTT AGGTTGA
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| Protein sequence | MADYQGKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRMT PPGLDKLPEA VERHTGSLND
EWLMAADLIV ASPGIALAHP SLSAAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT
TLVGEMAKAA GVNVGVGGNI GLPALMLLDD ECELYVLELS SFQLETTSSL QAVAATILNV
TEDHMDRYPF GLQQYRAAKL RIYENAKVCV VNADDALTMP IRGADERCVS FGVNMGDYHL
NHQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAAGLPRASS LKALTTFTGL
PHRFEVVLEH NGVRWINDSK ATNVGSTEAA LNGLHVDGTL HLLLGGDGKS ADFSPLARYL
NGDNVRLYCF GRDGVQLAAL RPEVAEQTET MEQAMRLLAP RVQPGDMVLL SPACASLDQF
KNFEQRGNEF ARLAKELG
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