| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0076 |
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| Symbol | sgrR |
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| ID | 6969269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 81450 |
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| End bp | 83108 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643384155 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_002268678 |
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| Protein GI | 209397844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTG CTCGTCTGCA ACAACAGTTC ATCCGCCTGT GGCAATGCTG CGAGGGTAAA
TCGCAGGACA CAACGCTCAA CGAACTGGCA GCGTTATTGA GCTGCTCGCG TCGTCATATG
CGTACCCTGC TCAACACCAT GCAGGATCGC GGCTGGCTGA CGTGGGAAGC GGAAGTCGGG
CGTGGTAAAC GCTCGCGTCT GACATTCCTC TATACCGGGC TGGCGCTTCA GCAACAGCGG
GCGGAAGACC TGCTGGAGCA GGACCGTATC GACCAACTAG TGCAGTTAGT TGGCGACAAA
GCGACTGTGA GGCAAATGCT GGTTTCTCAT CTGGGCCGCA GCTTCCGCCA GGGGCGGCAC
ATCCTGCGCG TGCTCTACTA TCGTCCGTTG CGTAATCTGC TACCTGGCAG CGCATTGCGC
CGTTCCGAAA CCCATATCGC CCGGCAAATC TTCAGTTCGC TAACGCGCAT AAATGAGGAA
AATGGGGAAC TGGAAGCAGA CATCGCCCAC CACTGGCAGC AAATATCACC GCTTCACTGG
CGTTTCTTTT TGCGTCCAGG AGTCCATTTT CATCATGGTC GTGAACTGGA AATGGACGAC
GTGATCGCCT CTTTAAAACG AATCAATACG CTGCCGCTCT ATTCGCATAT TGCTGACATT
GTGTCGCCGA CGCCCTGGAC GCTGGATATC CACCTCACGC AGCCGGATCG CTGGTTGCCG
TTACTGCTGG GACAAGTTCC GGCGATGATC CTGCCGCGCG AATGGGAAAC CCTCAGTAAC
TTTGCCAGCC ATCCCATCGG CACCGGTCCG TATGCGGTGA TTCGCAACAG CACCAATCAA
CTGAAAATTC AGGCATTCGA TGACTTCTTC GGTTACCGGG CATTAATCGA TGAAGTTAAC
GTCTGGGTTC TGCCGGAAAT TGCCGACGAG CCAGCCGGAG GGCTGATGCT AAAAGGTCCA
CAGGGCGAGG AAAAAGAGAT TGAAAGCCGC CTGGAGGAAG GTTGCTACTA TTTACTGTTC
GATAGCCGCA CCCATCGCGG GGCGAATCAG CAAGTCAGGG ACTGGGTAAG CTATGTGCTT
TCTCCAACTA ATCTGGTCTA TTTCGCTGAG GAACAGTACC AGCAACTGTG GTTCCCGGCT
TATGGACTGC TCCCCCGTTG GCATCATGCC CGCACCATAA CGAGCGAAAA ACCGGCTGGT
CTGGAAAGCC TCACCCTGAC CTTTTATCAG GATCACAGTG AGCATCGGGT GATTGCCGGG
ATCATGCAGC AGATTCTGGC AAGCCACCAG GTCACACTGG AAATCAAAGA GATCAGCTAC
GATCAGTGGC ATGAAGGAGA GATCGAGAGC GATATCTGGC TTAACAGCGC CAACTTTACG
CTGCCGCTGG ATTTTTCGCT GTTCGCGCAC CTGTGCGAGG TACCGCTGCT CCAACACTGT
ATTCCAATCG ACTGGCAAGT CGACGCCGCC CGCTGGCGCA ATGGCGAAAT GAACCTGGCG
AACTGGTGCC AACAACTGGT CGCCAGCAAA GCAATGGTGC CACTTATCCA CCACTGGCTG
ATCATTCAGG GACAACGCAG TATGCGCGGC CTGCGCATGA ACACCCTCGG CTGGTTTGAT
TTTAAATCAG CGTGGTTTGC GCCGCCGGAT CCAGAGTAG
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| Protein sequence | MPSARLQQQF IRLWQCCEGK SQDTTLNELA ALLSCSRRHM RTLLNTMQDR GWLTWEAEVG
RGKRSRLTFL YTGLALQQQR AEDLLEQDRI DQLVQLVGDK ATVRQMLVSH LGRSFRQGRH
ILRVLYYRPL RNLLPGSALR RSETHIARQI FSSLTRINEE NGELEADIAH HWQQISPLHW
RFFLRPGVHF HHGRELEMDD VIASLKRINT LPLYSHIADI VSPTPWTLDI HLTQPDRWLP
LLLGQVPAMI LPREWETLSN FASHPIGTGP YAVIRNSTNQ LKIQAFDDFF GYRALIDEVN
VWVLPEIADE PAGGLMLKGP QGEEKEIESR LEEGCYYLLF DSRTHRGANQ QVRDWVSYVL
SPTNLVYFAE EQYQQLWFPA YGLLPRWHHA RTITSEKPAG LESLTLTFYQ DHSEHRVIAG
IMQQILASHQ VTLEIKEISY DQWHEGEIES DIWLNSANFT LPLDFSLFAH LCEVPLLQHC
IPIDWQVDAA RWRNGEMNLA NWCQQLVASK AMVPLIHHWL IIQGQRSMRG LRMNTLGWFD
FKSAWFAPPD PE
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