Gene ECH74115_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0047 
SymbolfixC 
ID6971572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp48589 
End bp49875 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID643384128 
Productputative oxidoreductase FixC 
Protein accessionYP_002268651 
Protein GI209399776 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG ATATCTTTGA CGCCATCATC GTCGGTGCAG GGCTTGCCGG TTCGGTTGCC 
GCACTGGTGC TCGCCCGCGA AGGGGCGCAA GTGTTAGTTA TCGAGCGTGG CAATTCCGCA
GGTGCCAAGA ACGTCACCGG CGGGCGTCTC TATGCCCACA GCCTGGAACA CATTATTCCT
GGTTTCGCCG AATCCGCCCC GGTAGAACGC CTGATCACCC ATGAAAAACT CGCGTTTATG
ACGGAAAAGT CAGCGATGAC TATGGACTAC TGCAACGGTG ACGAAACCTC GCCATCCCAG
CGTTCTTACT CCGTTTTGCG CAGTAAATTT GATGCCTGGC TGATGGAGCA GGCCGAAGAA
GCGGGCGCGC AGTTAATTAC CGGGATCCGC GTCGATAACC TCGTACAGCG CGATGGCAAA
GTCGTCGGTG TAGAAGCCGA TGGCGATGTG ATTGAAGCGA AAACGGTGAT CCTTGCTGAT
GGAGTGAACT CCATCCTTGC CGAAAAGCTG GGGATGGCAA AACGCGTTAA ACCGACGAAT
GTGGCGGTTG GCGTGAAGGA ACTGATCGAG TTACCGAAGT CGGTTATTGA AGACCGTTTT
CAGTTGCAGG GTAATCAGGG GGCGGCTTGC CTATTTGCGG GATCACCCAC CGATGGCCTG
ATGGGCGGCG GTTTTCTTTA TACCAATGAA AACACCCTGT CGCTGGGGCT GGTTTGTGGT
CTGCATCATC TGCATGACGC GAAAAAATCG GTGCCGCAAA TGCTGGAAGA TTTCAAACAA
CATCCGGCCG TTGCACCGCT GATCGCGGGT GGCAAGCTGG TGGAATATTC CGCTCACGTA
GTGCCGGAAG CAGGCATCAA CATGCTGCCG GAGCTGGTCG GTGACGGCGT ATTGATTGCC
GGTGATGCCG CCGGAATGTG TATGAACCTC GGTTTTACCA TTCGCGGTAT GGATCTGGCG
ATTGCCGCCG GGGAAGCTGC AGCAAAAACC GTGCTTTCAG CGATGAAAAG CGACGATTTC
AGTAAGCAAA AACTCGCGGA ATATCGTCAG CATCTTGAGA GTGGCCCGCT GCGCGATATG
CGTATGTACC AGAAACTACC GGCCTTCCTT GATAACCCAC GCATGTTTAG CGGCTACCCG
GAACTGGCGG TAGGCGTGGC GCGTGACCTG TTCACCATTG ACGGCAGTGC GCCGGAACTG
ATGCGCAAGA AAATCCTCCG CCACGGCAAG AAAGTGGGCT TCATCAATCT GATCAAGGAT
GGCATGAAAG GAGTGACCGT TTTATGA
 
Protein sequence
MSEDIFDAII VGAGLAGSVA ALVLAREGAQ VLVIERGNSA GAKNVTGGRL YAHSLEHIIP 
GFAESAPVER LITHEKLAFM TEKSAMTMDY CNGDETSPSQ RSYSVLRSKF DAWLMEQAEE
AGAQLITGIR VDNLVQRDGK VVGVEADGDV IEAKTVILAD GVNSILAEKL GMAKRVKPTN
VAVGVKELIE LPKSVIEDRF QLQGNQGAAC LFAGSPTDGL MGGGFLYTNE NTLSLGLVCG
LHHLHDAKKS VPQMLEDFKQ HPAVAPLIAG GKLVEYSAHV VPEAGINMLP ELVGDGVLIA
GDAAGMCMNL GFTIRGMDLA IAAGEAAAKT VLSAMKSDDF SKQKLAEYRQ HLESGPLRDM
RMYQKLPAFL DNPRMFSGYP ELAVGVARDL FTIDGSAPEL MRKKILRHGK KVGFINLIKD
GMKGVTVL