Gene ECH74115_A0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_A0011 
Symbol 
ID6966509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011351 
Strand
Start bp5311 
End bp5661 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content41% 
IMG OID643384042 
Productconjugal transfer protein TraD 
Protein accessionYP_002268521 
Protein GI209395642 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3702] Type IV secretory pathway, VirB3 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGCCT GCGCAATTCA GGAGCTAATG ATGAATGATA CAGAGAAACC AAAGGTCGTC 
TTTCTTTCCT ATAACGGCCT GAATCGGCCT GCGATGATTA GGGGTGTTCC ATTGATGCTT
TTTTTGTCTG TGGGATTTCT TGCCGTGTTT GGTGGTTTTG GATGCATGTT TATGTGGGGA
ATTTCTGGAC TTATATTTCC TGCATTATGC TTCTTGTTTC TGTTCATTGT TCGCATCATT
TGTGAAAATG ACCCAAACGC TCTTAGTGTT ATGAATCTCC AGTTGAAGGG CTATTTTCTT
AAAGTGATGC ACAGAGACTC AATTATTGGT TTTTCCTCTG TGGAGCGTTG A
 
Protein sequence
MSACAIQELM MNDTEKPKVV FLSYNGLNRP AMIRGVPLML FLSVGFLAVF GGFGCMFMWG 
ISGLIFPALC FLFLFIVRII CENDPNALSV MNLQLKGYFL KVMHRDSIIG FSSVER