Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_A0011 |
Symbol | |
ID | 6966509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011351 |
Strand | + |
Start bp | 5311 |
End bp | 5661 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643384042 |
Product | conjugal transfer protein TraD |
Protein accession | YP_002268521 |
Protein GI | 209395642 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3702] Type IV secretory pathway, VirB3 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAGCCT GCGCAATTCA GGAGCTAATG ATGAATGATA CAGAGAAACC AAAGGTCGTC TTTCTTTCCT ATAACGGCCT GAATCGGCCT GCGATGATTA GGGGTGTTCC ATTGATGCTT TTTTTGTCTG TGGGATTTCT TGCCGTGTTT GGTGGTTTTG GATGCATGTT TATGTGGGGA ATTTCTGGAC TTATATTTCC TGCATTATGC TTCTTGTTTC TGTTCATTGT TCGCATCATT TGTGAAAATG ACCCAAACGC TCTTAGTGTT ATGAATCTCC AGTTGAAGGG CTATTTTCTT AAAGTGATGC ACAGAGACTC AATTATTGGT TTTTCCTCTG TGGAGCGTTG A
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Protein sequence | MSACAIQELM MNDTEKPKVV FLSYNGLNRP AMIRGVPLML FLSVGFLAVF GGFGCMFMWG ISGLIFPALC FLFLFIVRII CENDPNALSV MNLQLKGYFL KVMHRDSIIG FSSVER
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