Gene ECH74115_A0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_A0008 
Symbol 
ID6966517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011351 
Strand+ 
Start bp3677 
End bp4318 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID643384039 
Productconjugal transfer protein TrbJ 
Protein accessionYP_002268518 
Protein GI209395666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.873266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.733423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG AACTGTTTTC AGTGATTTTA ATAGGATGCA TGTGCTCTAA TGTCGCACAT 
GCTTATATCC CTGTTGTCGA TCCGACATCA ATTGCAAAAA CTGTTGAGGA AGGTTTAGCT 
AGGGCTAAAG AAGCTGCTGA TAATTTACAA CAACTGAAAA CTCAATATGA ACAATCTATT 
AAATATGCAG AGGATCAAAA AAAGAGATTA GAAGGATTCA CTGATTTTAG TAGAGGCTTT 
GATACAGCTT CAAGCTATAT GCGTGGTTCT CTTAAGGATA TCGATAGCGA TTCTCAGATT 
GGATTAGATT CTTTACGAAA GAAATATTCT TTAACCAGTT CTGATGCTAA CACGCAAAGA 
CGCTATGATG CTGTTCTTAA GCAAATAAAT TTTTACGAGC AGTTCAATAA ATCAATGTAT 
AAGCGGGCGG AACGTGTTCA ATCGTTACAG TCATTATTTG CAAATGCCAC TACGCCGCAG 
CAAAAAGCTG ATATTGCAAA TCAACTGTCG ATTGAAAAAA TGACAATAGA GTTGCAACTG 
AAACAATATG AACTAGCATC TAATCAGATG TCCGTTGATG AAAATGCTAG GCAAGAACAA 
GCTCGTAATG AGTGGCTAAG TTCTCATAGT TACAAACGTT AG
 
Protein sequence
MLKELFSVIL IGCMCSNVAH AYIPVVDPTS IAKTVEEGLA RAKEAADNLQ QLKTQYEQSI 
KYAEDQKKRL EGFTDFSRGF DTASSYMRGS LKDIDSDSQI GLDSLRKKYS LTSSDANTQR 
RYDAVLKQIN FYEQFNKSMY KRAERVQSLQ SLFANATTPQ QKADIANQLS IEKMTIELQL 
KQYELASNQM SVDENARQEQ ARNEWLSSHS YKR