| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0114 |
|---|
| Symbol | msbB |
|---|
| ID | 6966468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011350 |
|---|
| Strand | + |
|---|
| Start bp | 74170 |
|---|
| End bp | 75201 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643384010 |
|---|
| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| Protein accession | YP_002268489 |
|---|
| Protein GI | 209395556 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTCCT CTGCTGTCCG GTGGCCTCCA GGGATGGTAC CACCTTCTGC TGTACTCTGT
TATCATAATG AGATAAGCAG GCAGATACCG GTAAATATGA AAAATATCAG AACTGAGTTT
ATTCCCCGCT TTAACCTTAC ATTATGCTTC CCCCGTTACT GGATGACGTG GACAGGTATC
GGTATTATCT GTGTGTTTGC AATGGTCCCC CCCGCACTGA GAGATCCATT GTTGGGAAAA
TTGGGCATGC TGGTTGGGCG TCTGGGGAAA AGCGCACGTC AACGGGCCTT GATTAATTTA
TCGCTTTGTT TTCCGGAGTA CAGTGATAAA GAAAAGGAGA ATATCGTTGA TGCCATGTTT
GCAACAGCCT CCATGGCCGT TGTGCTTATG GCTGAATTAG CACTGTCCGG GCCTGATAAA
ATTTCGCATC GTATACGCTG GAATGGTCTG GAGATTGTGG AGAAGATGGC ACAGAACAAT
GAAAAGGTCA TTTTTCTTGT GCCACATGCC TGGGGAGTGG ATATTCCCGC AATGCTGATG
GCTGCGTCGG GCAGAAAAAT GGCAGCGATG TTTCATAACC AGAGAAATCC GGTGGTGGAT
TATGTCTGGA ACAGTGTTCG TCGTCGTTTC GGAGGAAAAC TGCACGCACG TAATGACGGT
ATTGCCTCCT TTGTCCGCTC AGTCCGGCAG GGATACTGGG GATATTATCT TCCTGATCAG
GATCATGGCC CGGAATTCAG TGAGTTTGCA GATTTTTTTG CGACGTATAA AGCAACTTTA
CCGGTTATCG GACGGCTCAG CAGGATCAGT GGTGCACGGA TAATACCGCT TTTCCCTGTT
TATGACGGAA AGACCCATCA TCTGACTATT CATGTCAGCC CGCCACTTGC TATACGACAG
AAGAGTGATG CTCATATTGC GCGACAGATA AACGAAGTGG TTGAAAATTT CGTTCGTCCA
CATCCTGAGC AGTATACGTG GATCCTCAAG TTGCTGAAAA CGCGTAAAGA AGGGGAAGAG
GATCCTTACT GA
|
|---|
| Protein sequence | MFSSAVRWPP GMVPPSAVLC YHNEISRQIP VNMKNIRTEF IPRFNLTLCF PRYWMTWTGI
GIICVFAMVP PALRDPLLGK LGMLVGRLGK SARQRALINL SLCFPEYSDK EKENIVDAMF
ATASMAVVLM AELALSGPDK ISHRIRWNGL EIVEKMAQNN EKVIFLVPHA WGVDIPAMLM
AASGRKMAAM FHNQRNPVVD YVWNSVRRRF GGKLHARNDG IASFVRSVRQ GYWGYYLPDQ
DHGPEFSEFA DFFATYKATL PVIGRLSRIS GARIIPLFPV YDGKTHHLTI HVSPPLAIRQ
KSDAHIARQI NEVVENFVRP HPEQYTWILK LLKTRKEGEE DPY
|
|---|
| |