Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_B0102 |
Symbol | |
ID | 6966452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011350 |
Strand | + |
Start bp | 63242 |
End bp | 64129 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643383999 |
Product | IS629, transposase orfB |
Protein accession | YP_002268478 |
Protein GI | 209395561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.147873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACTGC TGGATAAGCT GCGTGAGCAG TACGGGGTCG GACCGGTATG CAGTGAGCTG CATATTGCCC CGTCAACGTA TTACCACTGT CAGCAACAGC GACATCATCC TGATAAACGC AGTGCCCGTG CTCAGCGCGA TGACTGGCTG AAGAGAGAGA TACAGCGCGT ATACGATGAA AATCATCAGG TGTACGGTGT GCGTAAAGTC TGGCGCCAGT TGTTACGCGA AGGTATCAGG GTGGCCAGAT GTACAGTGGC GCGCCTCATG GCGGTTATGG GACTTGCCGG TGTTCTCCGG GGTAAAAAGA TCCGTACTAC CGTCAGCCGG AAAGCCGTTT CCGCAGGCGA CCGCGTAAAC CGTCAGTTCG TGGCAGAACG TCCTGACCAG CTGTGGGTGG CTGATTTTAC TTACGTCAGC ACATGGCAGG GCTTCGTCTA TGTGGCGTTC ATCATTGATG TGTTTGCCGG ATGTATCGTG GGGTGGCGGG TCTCATCGTC TATGGAAACG ACATTCGTGC TGGATGCACT GGAGCAGGCG TTGTGGGCCC GTCGGCCGTC CGGCACAGTC CATCACAGTG ATAAAGGTTC TCAGTATGTA TCACTGGCCT ATACGGAGCG ACTAAAAGAA GCAAAACTGC TGGCATCAAC AGGGAGTACA GGTGACTCGT ATGACAACGC GATGGCGGAG AGCATCAATG GTCTTTACAA AGCGGAGGTA ATACACCGTA AGAGCTGGAA AAACCGTGCA GAAGTGGAAC TGGCCACACT CACGTGGGTG GACTGGTATA ACAATCGACG ATTGCTGGGA AGGCTGGGTC ATATCCCTCC GGCAGAAGCA GAAAAAGCTT ATTATGCTTC CATCAGAAAC GATGATCTGG CAGCCTGA
|
Protein sequence | MPLLDKLREQ YGVGPVCSEL HIAPSTYYHC QQQRHHPDKR SARAQRDDWL KREIQRVYDE NHQVYGVRKV WRQLLREGIR VARCTVARLM AVMGLAGVLR GKKIRTTVSR KAVSAGDRVN RQFVAERPDQ LWVADFTYVS TWQGFVYVAF IIDVFAGCIV GWRVSSSMET TFVLDALEQA LWARRPSGTV HHSDKGSQYV SLAYTERLKE AKLLASTGST GDSYDNAMAE SINGLYKAEV IHRKSWKNRA EVELATLTWV DWYNNRRLLG RLGHIPPAEA EKAYYASIRN DDLAA
|
| |