Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_B0096 |
Symbol | |
ID | 6966407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011350 |
Strand | - |
Start bp | 59097 |
End bp | 59831 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643383993 |
Product | ISSd1, transposase OrfB |
Protein accession | YP_002268472 |
Protein GI | 209395562 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00302265 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACAG TATCTGCTGA GTCTGGTTCC CGACTGTCCG TGGCAGCATA TTGTGTTCAC ACTTCCCTGC CAGTACTGGT CCCTGGTGTT CCACAACCGG TGGTTACTGG CAGAGATGAG CCGCATTGCT GCGGATGTGA TACAGGAAAT CTGCCGCCAG GCAGATGTGC GACTACGAAC TCGAACCACA ATCTGCCAGT TGCGCCAAAT CTGCTGAACC AGACGTTCGC TCCTGCAGCA CCAAATCAGG TCTGGGTGGC GGACCTGACG TATGTTGCCA CACAGGAGGG ATGGTTGTAC CTCGCTGGCA TCAAAGATGT TTATACGTGC GAAATTGTCG GCTACGCCAT GGGAGAGCGC ATGACAAAAG AGCTGACAGG TAAAGCCCTG TTTATGGCGC TCAGGAGCCA GCGCCCACCT GCCGGGCTAA TCCACCACTC TGATCGAGGT TCACAGTACT GCGCATACGA TTACCGGGTC ATACAGGAGC AGTTTGGTCT GAAAACATCA ATGTCGCGTA AAGGTAACTG TTACGACAAC GCTCCGATGG AAAGCTTCTG GGGAACGCTG AAAAATGAGA GCCTGAGCCA CTATCGTTTT AATAACCGGG ATGAAGCCAT CTCAGTAATA CGGGAATACA TTGAGATTTT CTACAATCGT CAGCGTCGTC ACTCTCGTCT GGGGAATATC TCCCCGGCAG CCTTCAGGGA AAAATATCAT CAGATGGCTG CTTAA
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Protein sequence | MDTVSAESGS RLSVAAYCVH TSLPVLVPGV PQPVVTGRDE PHCCGCDTGN LPPGRCATTN SNHNLPVAPN LLNQTFAPAA PNQVWVADLT YVATQEGWLY LAGIKDVYTC EIVGYAMGER MTKELTGKAL FMALRSQRPP AGLIHHSDRG SQYCAYDYRV IQEQFGLKTS MSRKGNCYDN APMESFWGTL KNESLSHYRF NNRDEAISVI REYIEIFYNR QRRHSRLGNI SPAAFREKYH QMAA
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