Gene ECH74115_B0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0096 
Symbol 
ID6966407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp59097 
End bp59831 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID643383993 
ProductISSd1, transposase OrfB 
Protein accessionYP_002268472 
Protein GI209395562 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00302265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACAG TATCTGCTGA GTCTGGTTCC CGACTGTCCG TGGCAGCATA TTGTGTTCAC 
ACTTCCCTGC CAGTACTGGT CCCTGGTGTT CCACAACCGG TGGTTACTGG CAGAGATGAG
CCGCATTGCT GCGGATGTGA TACAGGAAAT CTGCCGCCAG GCAGATGTGC GACTACGAAC
TCGAACCACA ATCTGCCAGT TGCGCCAAAT CTGCTGAACC AGACGTTCGC TCCTGCAGCA
CCAAATCAGG TCTGGGTGGC GGACCTGACG TATGTTGCCA CACAGGAGGG ATGGTTGTAC
CTCGCTGGCA TCAAAGATGT TTATACGTGC GAAATTGTCG GCTACGCCAT GGGAGAGCGC
ATGACAAAAG AGCTGACAGG TAAAGCCCTG TTTATGGCGC TCAGGAGCCA GCGCCCACCT
GCCGGGCTAA TCCACCACTC TGATCGAGGT TCACAGTACT GCGCATACGA TTACCGGGTC
ATACAGGAGC AGTTTGGTCT GAAAACATCA ATGTCGCGTA AAGGTAACTG TTACGACAAC
GCTCCGATGG AAAGCTTCTG GGGAACGCTG AAAAATGAGA GCCTGAGCCA CTATCGTTTT
AATAACCGGG ATGAAGCCAT CTCAGTAATA CGGGAATACA TTGAGATTTT CTACAATCGT
CAGCGTCGTC ACTCTCGTCT GGGGAATATC TCCCCGGCAG CCTTCAGGGA AAAATATCAT
CAGATGGCTG CTTAA
 
Protein sequence
MDTVSAESGS RLSVAAYCVH TSLPVLVPGV PQPVVTGRDE PHCCGCDTGN LPPGRCATTN 
SNHNLPVAPN LLNQTFAPAA PNQVWVADLT YVATQEGWLY LAGIKDVYTC EIVGYAMGER
MTKELTGKAL FMALRSQRPP AGLIHHSDRG SQYCAYDYRV IQEQFGLKTS MSRKGNCYDN
APMESFWGTL KNESLSHYRF NNRDEAISVI REYIEIFYNR QRRHSRLGNI SPAAFREKYH
QMAA