Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_B0082 |
Symbol | finO |
ID | 6966426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011350 |
Strand | + |
Start bp | 52994 |
End bp | 53629 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643383980 |
Product | conjugal transfer fertility inhibition protein FinO |
Protein accession | YP_002268459 |
Protein GI | 209395563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.364802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATTAA CTTCCTGTTA CGATGAGCCG TTTCAACGGC CTGCAGGGCA TATTTTCACG AAGGTCAGAG TAAGCATGGC AGAGCAAAAA CGACCGGTAC TGACACTGAA GCGGAAAACG GAAGGAGAGA CGCCTGTCCG CAGCCGGAAA ACCATCATCA ATGTCACCAC GCCACCAAAA TGGAAGGTGA AAAAGCAGAA GCTGGCCGAG AAAGCAGCCC GGGAAGCGGA GCTGGCGGCA AAAAAAGCGC AGGCCAGACA GGCGCTGTCC ATTTATCTGA ACCTGCCCAC GCAGGATGAG GCCGTGAACA CCCTGAAACC CTGGTGGCCG GGATTATTTG ACGGTGACAC GCCCCGGCTT CTGGCCTGCG GTATCCGGGA CGTGTTACTG GAAGACGTGG CGCAGCGGAA TATCCCGCTC TCGCATAAAA AGCTGCGCAG GGCGCTGAAG GCCATCACCC GTTCAGAAAG CTATCTGTGT GCCATGAAAG CCGGTGCCTG CCGGTATGAC ACGGAAGGGT ATGTGACGGA GCATATTTCT CAGGAGGAGG AAGCGTATGC GGCAGCGCGT CTGGATAAAA TCCGCCGCCA GAACCGGATA AAGGCAGAAC TTCAGGCCGT GCTTGATGAG AAATAA
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Protein sequence | MKLTSCYDEP FQRPAGHIFT KVRVSMAEQK RPVLTLKRKT EGETPVRSRK TIINVTTPPK WKVKKQKLAE KAAREAELAA KKAQARQALS IYLNLPTQDE AVNTLKPWWP GLFDGDTPRL LACGIRDVLL EDVAQRNIPL SHKKLRRALK AITRSESYLC AMKAGACRYD TEGYVTEHIS QEEEAYAAAR LDKIRRQNRI KAELQAVLDE K
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