| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0046 |
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| Symbol | sopB |
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| ID | 6966484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 19949 |
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| End bp | 20920 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643383949 |
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| Product | plasmid-partitioning protein |
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| Protein accession | YP_002268428 |
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| Protein GI | 209395635 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.047127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTG CGCCTGTTAT TCCAAAACAT ACGCTCAATA CTCAACCGGT TGAAGATACT
TCGTTATCGA CACCAGCTGC CCCGATGGTG GATTCGTTAA TTGCGCGCGT AGGAGTAATG
GCTCGCGGTA ATGCCATTAC TTTGCCTGTA TGTGGTCGGG ATGTGAAGTT TACTCTTGAA
GTGCTCCGGG GTGATAGTGT TGAGAAGACC TCTCGGGTAT GGTCAGGTAA TGAACGTGAC
CAGGAGCTGC TTACTGAGGA CGCACTGGAT GATCTCATCC CTTCTTTTCT ACTGACTGGT
CAACAGACAC CGGCGTTCGG TCGAAGAGTA TCTGGTGTCA TAGAAATTGC CGATGGGAGT
CGCCGTCGTA AAGCTGCTGC ACTTACCGAA AGTGATTATC GTGTTCTGGT TGGCGAGCTG
GATGATGAGC AGATGGCTGC ATTATCCAGA TTGGGTAACG ATTATCGCCC AACAAGTGCT
TATGAACGTG GTCAGCGTTA TGCAAGCCGA TTGCAGAATG AATTTGCTGG AAATATTTCT
GCGCTGGCTG ATGCGGAAAA TATTTCACGT AAGATTATTA CCCGCTGTAT CAACACAGCC
AAATTGCCTA AATCAGTTGT TGCTCTTTTT TCTCACCCCG GTGAACTATC TGCCCGGTCA
GGTGATGCAC TTCAAAAAGC CTTTACAGAT AAAGAGGAAT TACTTAAGCA GCAGGCATCT
AACCTTCATG AGCAGAAAAA AGCTGGGGTG ATATTTGAAG CTGAAGAAGT TATCACTCTT
TTAACTTCTG TGCTTAAAAC GTCATCTGCA TCAAGAACTA GTTTAAGCTC ACGACATCAG
TTTGCTCCTG GAGCGACAGT ATTGTATAAG GGCGATAAAA TGGTGCTTAA CCTGGACAGG
TCTCGTGTTC CAACTGAGTG TATAGAGAAA ATTGAGGCCA TTCTTAAGGA ACTTGAAAAG
CCAGCACCCT GA
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| Protein sequence | MKRAPVIPKH TLNTQPVEDT SLSTPAAPMV DSLIARVGVM ARGNAITLPV CGRDVKFTLE
VLRGDSVEKT SRVWSGNERD QELLTEDALD DLIPSFLLTG QQTPAFGRRV SGVIEIADGS
RRRKAAALTE SDYRVLVGEL DDEQMAALSR LGNDYRPTSA YERGQRYASR LQNEFAGNIS
ALADAENISR KIITRCINTA KLPKSVVALF SHPGELSARS GDALQKAFTD KEELLKQQAS
NLHEQKKAGV IFEAEEVITL LTSVLKTSSA SRTSLSSRHQ FAPGATVLYK GDKMVLNLDR
SRVPTECIEK IEAILKELEK PAP
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