| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0045 |
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| Symbol | sopA |
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| ID | 6966381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 18792 |
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| End bp | 19949 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643383948 |
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| Product | plasmid-partitioning protein SopA |
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| Protein accession | YP_002268427 |
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| Protein GI | 209395633 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.257222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAC TTAACCAGTG CATAAACGCT GGTCATGAAA TGACGAAGGC TATCGCCATT
GCACAGTTTA ATGATGACAG CCCGGAAGCG AGGAAAATAA CCCGGCGCTG GAGAATAGGT
GAAGCAGCGG ATTTAGTTGG GGTTTCTTCT CAGGCTATCA GAGATGCCGA GAAAGCAGGG
CGACTACCGC ACCCGGATAT GGAAATTCGA GGACGGGTTG AGCAACGTGT TGGTTATACA
ATTGAACAAA TTAATCATAT GCGTGATGTG TTTGGTACGC GATTGCGACG TGCTGAAGAC
GTATTTCCAC CGGTGATCGG GGTTGCTGCC CATAAAGGTG GCGTTTACAA AACCTCAGTT
TCTGTTCATC TTGCTCAGGA TCTGGCTCTG AAGGGGCTAC GTGTTTTGCT CGTGGAAGGT
AACGACCCCC AGGGAACAGC CTCAATGTAT CACGGATGGG TACCAGATCT TCATATTCAT
GCAGAAGACA CTCTCCTGCC TTTCTATCTT GGGGAAAAGG ACGATGTCAC TTATGCAATA
AAGCCCACTT GCTGGCCGGG GCTTGACATT ATTCCTTCCT GTCTGGCTCT GCACCGTATT
GAAACTGAGT TAATGGGCAA ATTTGATGAA GGTAAACTGC CCACCGATCC ACACCTGATG
CTCCGACTGG CCATTGAAAC TGTTGCTCAT GACTATGATG TCATAGTTAT TGACAGCGCG
CCTAACCTGG GTATCGGCAC GATTAATGTC GTATGTGCTG CTGATGTGCT GATTGTTCCC
ACTCCTGCTG AGTTGTTTGA CTACACCTCC GCACTGCAGT TTTTCGATAT GCTTCGTGAT
CTGCTCAAGA ACGTTGATCT TAAAGGGTTC GAGCCTGATG TACGTATTTT GCTTACCAAA
TACAGCAATA GTAATGGCTC TCAGTCCCCG TGGATGGAGG AGCAAATTCG GGATGCCTGG
GGAAGCATGG TTCTAAAAAA TGTTGTACGT GAAACGGATG AAGTTGGTAA AGGTCAGATC
CGGATGAGAA CTGTTTTTGA ACAGGCCATT GATCAACGCT CTTCAACTGG TGCCTGGAGA
AATGCTCTTT CTATTTGGGA ACCTGTCTGC AATGAAATTT TCGATCGTCT GATTAAACCA
CGCTGGGAGA TTAGATAA
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| Protein sequence | METLNQCINA GHEMTKAIAI AQFNDDSPEA RKITRRWRIG EAADLVGVSS QAIRDAEKAG
RLPHPDMEIR GRVEQRVGYT IEQINHMRDV FGTRLRRAED VFPPVIGVAA HKGGVYKTSV
SVHLAQDLAL KGLRVLLVEG NDPQGTASMY HGWVPDLHIH AEDTLLPFYL GEKDDVTYAI
KPTCWPGLDI IPSCLALHRI ETELMGKFDE GKLPTDPHLM LRLAIETVAH DYDVIVIDSA
PNLGIGTINV VCAADVLIVP TPAELFDYTS ALQFFDMLRD LLKNVDLKGF EPDVRILLTK
YSNSNGSQSP WMEEQIRDAW GSMVLKNVVR ETDEVGKGQI RMRTVFEQAI DQRSSTGAWR
NALSIWEPVC NEIFDRLIKP RWEIR
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