Gene ECH74115_B0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0041 
Symbol 
ID6966450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp16151 
End bp17038 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content54% 
IMG OID643383945 
ProductIS629, transposase orfB 
Protein accessionYP_002268424 
Protein GI209395591 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGC TGGATAAGCT GCGTGAGCAG TACGGGGTCG GACCGGTATG CAGCGAACTG 
CATATTGCCC CGTCAACGTA TTACCATTGT CAGCAACAGC GACATCATCC GGATAAACGC
AGTGCCCGTG CGCAGCACGA CGACTGGCTG AAGAGAGAGA TACAGCGCGT ATACGATGAA
AATCATCAGG TGTACGGTGT GCGTAAAGTC TGGCGTCAGT TGTTACGGGA AGGAATCAGG
GTGGCCAGAT GTACAGTGGC ACGTCTCATG GCGGTTATGG GACTTGCCGG TGTTCTCCGG
GGTAAAAAGG TCCGTACGAC CATCAGCCGG AAAGCCGTTG CCGCAGGCGA CCGCGTAAAC
CGTCAGTTCG TGGCAGAACG ACCTGACCAG CTGTGGGTGG CTGATTTTAC TTACGTCAGC
ACATGGCAGG GCTTCGTCTA TGTGGCGTTT ATCATTGATG TGTTTGCCGG ATACATCGTG
GGGGGGCGGG TCTCATCGTC TATGGAAACG ACATTCGTGC TGGATGCGCT GGAGCAGGCG
TTGTGGGCCC GTCGTCCGTC TGGCACCATC CATCACAGCG ATAAAGGCTC TCAGTATGTG
TCACTGGCCT ATACGGAGCG ACTAAAAGAA GCCGGATTAC TGGCATCAAC AGGGAGTACA
GGCGACTCGT ATGACAACGC GATGGCTGAG AGCATCAATG GTCTTTACAA AGCGGAGGTA
ATACACCGTA AGAGCTGGAA AAACCGTGCA GAAGTGGAAC TGGCCACACT AACGTGGGTG
GACTGGTATA ACAATCGACG ATTGCTGGGA AGGCTGGGCC ATACTCCTCC GGCAGAAGCA
GAAAAAGCTT ATTATGCTTC CATCGGAAAC GATGATCTGG CAGCCTGA
 
Protein sequence
MPLLDKLREQ YGVGPVCSEL HIAPSTYYHC QQQRHHPDKR SARAQHDDWL KREIQRVYDE 
NHQVYGVRKV WRQLLREGIR VARCTVARLM AVMGLAGVLR GKKVRTTISR KAVAAGDRVN
RQFVAERPDQ LWVADFTYVS TWQGFVYVAF IIDVFAGYIV GGRVSSSMET TFVLDALEQA
LWARRPSGTI HHSDKGSQYV SLAYTERLKE AGLLASTGST GDSYDNAMAE SINGLYKAEV
IHRKSWKNRA EVELATLTWV DWYNNRRLLG RLGHTPPAEA EKAYYASIGN DDLAA