| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0035 |
|---|
| Symbol | |
|---|
| ID | 6966440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011350 |
|---|
| Strand | - |
|---|
| Start bp | 13055 |
|---|
| End bp | 13942 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643383939 |
|---|
| Product | IS629, transposase orfB |
|---|
| Protein accession | YP_002268418 |
|---|
| Protein GI | 209395601 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGC TGGATAAGCT GCGTGAGCAG TACGGGGTCG GACCGGTATG CAGTGAACTG
CATATTGCCC CGTCAACGTA TTACCACTGT CAGCAACAGC GACATCATCC GGATAAACGC
AGTGCCCGTG CGCAGCGCGA TGACTGGCTG AAGAGAGAGA TACAGCGCGT ATACGATGAA
AATCATCAGG TGTACGGTGT GCGTAAAGTC TGGCGCCAGT TGTTACGCGA AGGTATCAGG
GTGGCCAGAT GTACAGTGGC GCGCCTCATG GCGGTTATGG GACTTGCCGG TGTTCTCCGG
GGTAAAAAGG TCCGTACTAC CGTCAGCCGG AAAGCCGTTT CCGCAGGCGA CCGCGTAAAC
CGTCAGTTCG TGGCAGAACG TCCTGACCAG CTGTGGGTGG CTGATTTTAC TTACGTCAGC
ACATGGCAGG GCTTCGTCTA TGTGGCGTTC ATCATTGATG TGTTTTCCGG ATGTATCGTG
GGGTGGCGAG TCTCATCGTC TATGGAAACG ACATTCGTGC TGGATGCACT GGAGCAGGCG
TTGTGGGCCC GTCGGCCGTC CGGCACAGTC CATCACAGTG ATAAAGGTTC TCAGTATGTA
TCACTGGCCT ATACGGAGCG ACTAAAAGAA GCAAAACTGC TGGCATCAAC AGGGAGTACA
GGTGACTCGT ATGACAACGC GATGGCGGAG AGCATCAATG GTCTTTACAA AGCGGAGGTA
ATACACCGTA AGAGCTGGAA AAACCGTGCA GAAGTGGAAC TGGCCACACT CACGTGGGTG
GACTGGTATA ACAATCGACG ATTGCTGGGA AGGCTGGGTC ATATCCCTCC GGCAGAAGCA
GAAAAAGCTT ATTATGCTTC CATCAGAAAC GATGATCTGG CAGCCTGA
|
|---|
| Protein sequence | MPLLDKLREQ YGVGPVCSEL HIAPSTYYHC QQQRHHPDKR SARAQRDDWL KREIQRVYDE
NHQVYGVRKV WRQLLREGIR VARCTVARLM AVMGLAGVLR GKKVRTTVSR KAVSAGDRVN
RQFVAERPDQ LWVADFTYVS TWQGFVYVAF IIDVFSGCIV GWRVSSSMET TFVLDALEQA
LWARRPSGTV HHSDKGSQYV SLAYTERLKE AKLLASTGST GDSYDNAMAE SINGLYKAEV
IHRKSWKNRA EVELATLTWV DWYNNRRLLG RLGHIPPAEA EKAYYASIRN DDLAA
|
|---|
| |