| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0020 |
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| Symbol | |
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| ID | 6966412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 5883 |
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| End bp | 7322 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643383927 |
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| Product | leukotoxin secretion protein D |
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| Protein accession | YP_002268406 |
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| Protein GI | 209395593 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTT ACATGAAAGG TTTATGGGAT TTGGTTTGCC GTTATAAGAC GGTTTTTTCT
GATGTCTGGA AAATTCGTCA CACACTTGAT GCTCCTGTGA GAGAAAAAGA TGAGTATGCA
TTTCTTCCTG CTCACCTTGA ACTCATTGAA ACACCAGTAT CCAGACGTTC TCATTTTGTT
GTATGGAGTA TTTTATTATT TGTAATTATA TCTCTTCTCT TATCTGTTCT TGGGAAAGTT
GAAGTGGTTT CAGTAGCAAA TGGTAAGTTT ACTCATAGTG GAAGAAGCAA AGAAATAAAA
CCGATAGAGA ATGCGATTGT AGAAAAAATA ATGGTAAAAG ATGGCTCTTT TGTAAAAAAA
AATGATCCAT TAGTTGAATT GACGGTGCCT GGTGTTGAAT CTGATATTTT AAAATCAGAA
GCATCTTTGT TGTATGAAAA AACAGAACAA TATCGCTACG CAATTCTTTC TGAATCAATA
CAACGGAATG AGCTTCCTGA AATAAGGATA ACAGATTTTC CTGGCGGAGA AGATAATGCG
GGAGGTGAAC ATTTTCAGAG GGTTAGCTCA TTAATAAAAG AGCAATTCAT GACATGGCAG
AACAGAAAAA ATCAAAAGCA GATCACATTA AATAAAAAAA TAGTTGAACG GGATGCAGCG
CTTGCTCGTG TTAGCCTGTA TGAGCATCAG GTATCACAGG AAGGAAGAAA ACTCAATGAT
TTTAAGTATT TGTTGAATAA AAAAGCTGTT TCTCAACATT CAGTTATGGA GCAGGAAAAT
AGCTATATTC AGGCAAAAAA TGAACATGCA GTCTGGCTTG CACAGGTTTC TCAACTTGAA
AAAGAAATAG AACTTGTGCG GGAAGAACTG GCACTGGAGA CGAATATCTT CAGAAGTGAA
ATTATCGAGA AGCACAGAAA ATCAACAGAT AACATTGTGT TGCTGGAGCA TGAGCTTGAA
AAAAACAGGC AGAGAAAAGC ATCATCTTTT ATTAAAGCTC CTGTGAGTGG TACTGTTCAG
GAGTTAAATA TACATACAGA AGGTGGTGTT GTCACAACAG CAGAAACGCT GATGATTATT
GTCCCTGATA ATGATATTCT CGAAGTAACA GCATCTGTAC TTAACAAGGA TATCGGTTTT
ATACAACCTG GACAGGAGGT CGTTATTAAA GTAGATGCAT ATCCATATAC ACGTCATGGT
TACCTTACAG GGAAAGTAAA AAATATAACT GCAGATTCTG TTTCTGTTCC GGATACAGGG
CTTGTATTTA ACGTGATTAT ATCTGTTGAT CGGAATGATA TACAGGGAGA AAGAAAAAAA
ATCCCTGTTA CAGCTGGAAT GACTGTTATG GCAGAAATAA AAACCGGGGT GCGTAGTGTT
ATCAGCTATC TTCTTAGTCC ATTAAAGGAA ACTATTAATG AAAGTTTACG TGAACGTTAG
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| Protein sequence | MRFYMKGLWD LVCRYKTVFS DVWKIRHTLD APVREKDEYA FLPAHLELIE TPVSRRSHFV
VWSILLFVII SLLLSVLGKV EVVSVANGKF THSGRSKEIK PIENAIVEKI MVKDGSFVKK
NDPLVELTVP GVESDILKSE ASLLYEKTEQ YRYAILSESI QRNELPEIRI TDFPGGEDNA
GGEHFQRVSS LIKEQFMTWQ NRKNQKQITL NKKIVERDAA LARVSLYEHQ VSQEGRKLND
FKYLLNKKAV SQHSVMEQEN SYIQAKNEHA VWLAQVSQLE KEIELVREEL ALETNIFRSE
IIEKHRKSTD NIVLLEHELE KNRQRKASSF IKAPVSGTVQ ELNIHTEGGV VTTAETLMII
VPDNDILEVT ASVLNKDIGF IQPGQEVVIK VDAYPYTRHG YLTGKVKNIT ADSVSVPDTG
LVFNVIISVD RNDIQGERKK IPVTAGMTVM AEIKTGVRSV ISYLLSPLKE TINESLRER
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