Gene ECH74115_B0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0013 
Symbol 
ID6966474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp91632 
End bp92456 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID643384029 
ProductPeptidase A24 N- domain protein 
Protein accessionYP_002268508 
Protein GI209395581 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.846368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGAAT TTGCGGTTGA TTATCCCTTG TTGTGGCTCA TCTGCACCGG AGGGCTGGGG 
GGCGTTACCG GCAGTTTTCT TAACGTCGTG ATTCATCGTC TGCCGATAAT GTTGGAGAGG
CGGTGGCGGC GTGAAGCGCT GACGCTATTG GCACATTCTG TGCCTGAGTC CGGGCCGGCC
TTTAACCTGA TGATACCGCA GTCTCATTGT CCCTGCTGTT TTCATCCGCT CGGCATCAGG
GATAACATTC CCCTGTTAAG CTACCTATTT CTGAAGGGGA AATCACGCTG TTGTGGCGAG
CGTATTCCCG TTTACTACCC GCTAGTCGAA ATAACGAACT CAGTGTTATT CATTCTGGCC
GCGAGCAGGT TTCCACCAGG GCTGACATTA GCGGCTGCCT GGCTTTTTAT TTCCATGCTG
TTGGTTCTGG CGGTTATTGA CTGCCATACG GCGCTGCTGC CGGATGTGCT GACGTTGCCA
TTGCTCTGGC TTGGCCTGTT ATTCAGTTTA CAGAGAGGCG TTGTCACCTT AGAGGAGGCG
GTAGTGGGGG CGGTATCTGG GTATCTCTGT CTGTGGGGAC TGTACTGGCT TTTTCGTTTC
GCTACCGGGA GGGAAGGGTT AGGTTACGGT GATTTTAAGC TAGCTGCGGC ATTGGGAGCA
TGGATGGGTT GGCAGGCATT ACCCTCAATA CTTTTGTTTG CCTCAGTCAG TGGGTTAATC
GTAACAGTAC TGTTGCGTAT TGTAACAGCT ACGGACTTTA CCCGCCCGCT GCCTTTTGGG
CCGTGGCTCG CTTTGAGCGG AGTGTGCCAT TTTTTGTTGA TGTAG
 
Protein sequence
MPEFAVDYPL LWLICTGGLG GVTGSFLNVV IHRLPIMLER RWRREALTLL AHSVPESGPA 
FNLMIPQSHC PCCFHPLGIR DNIPLLSYLF LKGKSRCCGE RIPVYYPLVE ITNSVLFILA
ASRFPPGLTL AAAWLFISML LVLAVIDCHT ALLPDVLTLP LLWLGLLFSL QRGVVTLEEA
VVGAVSGYLC LWGLYWLFRF ATGREGLGYG DFKLAAALGA WMGWQALPSI LLFASVSGLI
VTVLLRIVTA TDFTRPLPFG PWLALSGVCH FLLM