| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0010 |
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| Symbol | gspK |
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| ID | 6966413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 88878 |
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| End bp | 89855 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384026 |
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| Product | general secretion pathway protein K |
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| Protein accession | YP_002268505 |
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| Protein GI | 209395590 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.199585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGC GGGAACAGGG CGTGGCGCTT CTGGTGGTAT TGCTGATCCT GTCGTTAATG
GTAACGATAG CGGCGGTGAT TGCGGAGCGC AACGGTCGGA CATTTTTGCG TACAGTAGCG
CAGTTGGATC AGCTGCAGGC AAAGTGGGAT GGCTATACGG CAGAGACGAT AGCAAAACAA
ATCTTACAGA GGAGCAGGCA GGAGTCGCCC CGGAAAACGC ATCTGGCACA AAATTGGGCG
CAGTCAGAAC GACAGTTTGA GACCAGAGGG GGAGATGTGC GGGGGCAGAT CGTGGATGCG
CAGGCCTGTT TTAATCTTAA TGCTATTAAT TATGGAGTGG TGGATCTGAC CAGTATACCT
TATGCCGCCA GAATTTTTCA GCAGCTATTA ATCAACTTGC AGGTAGAGCT TTTACAGGCC
CGGCAAGTGA CGGCAGCCCT ACGTGACTGG ATCGATCGTG ATGATAAGCC GGTAAGGGGC
GGTGCTGAAG ACGAGGTGTA TATGGGGATG GAACCTCCCT ATCTGGCAGC CAACCAGCCG
ATGCAGGACG TCAGTGAGTT ACGCCTTATC CGGGGAATAG ATGCCAGGCT TTACCGCAAA
CTTTTGCCGT ATGTTTGTGT ACTGCCTACG TCAGATCTGT CTGTGAATGT GAATACTCTG
CTGGATTCAC AGGCGCCGCT GCTGGCGGCG CTCTTTCTGA CGAAACCGGA CAGTCTTCCG
GTGACGGAAT TACTGCAGCG GCGACCCCGT ACTGGTTGGG AGAGCGTGGC GGCGTTTCTT
GACGCGCCAC CGCTTAAGGA CATTGACACC AGTGCGGCCA TGCCGGTATT GGCCGTCAGC
AGCAACTATT TTCTGGTTCG GTTACATGTG CGCTCCGGGG AACACCTGTT CAGTCAGCAG
ACTTTAATGC AGTGGAGGGA GGAGCGTTTC CGGATCATTC AGCGACAGTA TGGATTAACG
ATGAGGGAGG TTCCCTGA
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| Protein sequence | MKLREQGVAL LVVLLILSLM VTIAAVIAER NGRTFLRTVA QLDQLQAKWD GYTAETIAKQ
ILQRSRQESP RKTHLAQNWA QSERQFETRG GDVRGQIVDA QACFNLNAIN YGVVDLTSIP
YAARIFQQLL INLQVELLQA RQVTAALRDW IDRDDKPVRG GAEDEVYMGM EPPYLAANQP
MQDVSELRLI RGIDARLYRK LLPYVCVLPT SDLSVNVNTL LDSQAPLLAA LFLTKPDSLP
VTELLQRRPR TGWESVAAFL DAPPLKDIDT SAAMPVLAVS SNYFLVRLHV RSGEHLFSQQ
TLMQWREERF RIIQRQYGLT MREVP
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