Gene ECH74115_B0008 details

Gene Information

• Locus tag: ECH74115_B0008
• Symbol: gspI
• ID: 6966434
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011350
• Strand: +
• Start bp: 87920
• End bp: 88285
• Gene Length: 366 bp
• Protein Length: 121 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643384024
• Product: general secretion pathway protein I
• Protein accession: YP_002268503
• Protein GI: 209395599
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.172677
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAGGGGC AAGAAGGAAT GACATTACTG GAAGTCATAG TAGCTCTGGT TGTGTTTGCG 
CTGGCAGGAA TGGCGCTGAT GCAGGCCTCG ACCCAGCAGG CTGCGGGGAT CGGACGGATG 
GAAGAGAAGG TGCTGGCAGG CTGGTTGGCC GATAACCAGA TGGTGCAATT GCAACTCGAG 
AAAACTTGGC CGGAAAATGG CTGGGGCGAG AAGACGATCA GCTTCGCTGG CACCGAATGG 
TATTTACGCT GGGGCGGGCC GGACAGCGAC GTGCCGCAGC CGCGCTCCTT AGAGGTAGAG 
GTACGGCGCA CTAAAGAGGA GACGTCCGCC TTGGTTTCCT TGCGTAGCAG TGTGGTTCGT 
GAATGA 

 

Protein sequence

MKGQEGMTLL EVIVALVVFA LAGMALMQAS TQQAAGIGRM EEKVLAGWLA DNQMVQLQLE 
KTWPENGWGE KTISFAGTEW YLRWGGPDSD VPQPRSLEVE VRRTKEETSA LVSLRSSVVR 
E