Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p43_03 |
Symbol | |
ID | 6962655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011316 |
Strand | + |
Start bp | 2287 |
End bp | 3366 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | transposase, IS91 family |
Protein accession | YP_002265405 |
Protein GI | 215538595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.517825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCCT GTGGGACAGC GGCTTTTGGC TCTCGCGAAT ATCATTGTTG CAACCCTGAC TGTACCCATA TCAAATATAT TCACCAAACC TGTAAATCTC GAGCGTGCAG TAGCTGTGGC ATGAAAGCCA CAGAGCGATG GATACAAAAG CAACAACATG TCTTCCCTGA ATGCGAATAT CAACACATCA CCTTTACCCT TCCAAACACG CTATGGCCTA TCTTTCGTCA TAACCGTTGG CTGTTAAATA AATTATTCAA ATGTGCTGCA AACATTCTGC TGGGATGGGC AAAAGATAAA GGAATAGATG TCGGTATCTT TTGTGCTCTT CATACTTACG GTCGAAAACT GAATTGGAAT ACGCACTTAC ATTTATCGGT CACTCGTGGG GGAATTTGTG AACGTACCGG TTTATGGAAA CCCATTTACT TCCAAATGAA AACGACAGAG CCTTGTTGGA GAGCGGCTAT CGTCAGTTTA TTGGGTAAGG CTTATTATGA GCTTGATTTA TCAAGCGAAG AATGCCCCTA TATCCGTAAT AAAACGGATT GGTCACGCTT TTTAAGCAGT CAATATAATC GTCGTTGGAA GCTTCATTTT GCTAAAAAGA CAAATAATGT AAAACCGACG ATGAACTATC TTGGTCGGTA TTTAAAACGG CCCCCAATTT CAGCGTCACG TTTAAGTCAT TACGCCAAAG GCGGAATGAT AACGTTTAAT TATTTAGACC ATCGAACAGG AACAACAGAC AGCCTAACAT TATCACCAGA AGAGATGATA AGACGGATAG TAGAGCACTA TCCTGATAAA CATTTCAAGA TGATCCGATA CTACGGTTTT TTATCAATGC GTCGTCGTGG AGAAGCTCTG CCTAGAGTTT ATGCAGCTTT AGGTATGACA ATAGAAGCTG AGCCGAAAAT GCCAGGGTAT GCCGCAATGT TAAAAGGATA TGTAAAAGTA GATCCGTACG AATGTATTTT ATGTGAAAGT CGTCTGGTGT TTACGAATTT CCGAGTCGGA AATTCGGTCA ATGATTTAGT CACCCATGCG ATAGTTCAGT CAGAATTGAG GGCAGCATAA
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Protein sequence | MLSCGTAAFG SREYHCCNPD CTHIKYIHQT CKSRACSSCG MKATERWIQK QQHVFPECEY QHITFTLPNT LWPIFRHNRW LLNKLFKCAA NILLGWAKDK GIDVGIFCAL HTYGRKLNWN THLHLSVTRG GICERTGLWK PIYFQMKTTE PCWRAAIVSL LGKAYYELDL SSEECPYIRN KTDWSRFLSS QYNRRWKLHF AKKTNNVKPT MNYLGRYLKR PPISASRLSH YAKGGMITFN YLDHRTGTTD SLTLSPEEMI RRIVEHYPDK HFKMIRYYGF LSMRRRGEAL PRVYAALGMT IEAEPKMPGY AAMLKGYVKV DPYECILCES RLVFTNFRVG NSVNDLVTHA IVQSELRAA
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