| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p320_30 |
|---|
| Symbol | |
|---|
| ID | 6962649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011314 |
|---|
| Strand | + |
|---|
| Start bp | 25691 |
|---|
| End bp | 26980 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002265398 |
|---|
| Protein GI | 209967972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TTGGTTATAT TACTTGGGGG TGCGGCTCGC AAGTGCTTTC TTTTCGTGAT
TATTCTCATT GGATAGATGA TCTTATCTAT GTTCACGAAC TGCCAAAGAT AAATCTAAAC
CAATACGCGG CAGTGATTAT AGCTTGTCAC ACTAATGGAG AATTTATTGC TCAGCATGCT
GAGCAGATTA ATCAATACGT TCGTGATGGT GGCTTCCTTA TCGCATTTCC TGTGCGAGGC
ATCGACCAAT GGCTTGATGT TGTAGATGTA AAGTGGGAAG ACAAACGTAT AGAAGATTGG
CTATGGTGGA CAAAATCTGA TGGCTATATT GAACTTTATC AACCCACGAG AGATCATAGT
TTATTTGATT TTGTCAATAT TGAAGATATG AAGTGGCACT GGCATGGTGT ATTTGCTTGC
GGACATACAG GCTTGTCACT ACTCAATACA GAAAATGCTC ACGACTCATT GATAGTCGAC
TTCCCTAACT TACCAAATAA TGGACGAGTG CTGTTAACCA CACTCGACCC ACACAGTCAC
AATGGTCAAC GTTTTATGCC TGCAGCAACG CGCTTTGTGA CAGGCTTCTA TCCTTGGCTG
AACTGTGAGT TAAGTATTGA TCGTGAGGTG ATTCCTGACT TTAATGTTAC TTACTTATCA
AGTAGCGATA TTCCAACAGA AAATGAACCG CCATACTTGG CGGCTACTTT TGACAATACA
CCAGGTAATA TTAATTTCAA ATCTATCTAT GAACTGCAAG ATCATATATG GTTAAGCGAT
GTGCTAATCG TGCCGCGTAT TTGCGATCAG TTCTATCTCC GAACGCTACA AGATAAGTTT
ATGAATTACT TAGCTAAAGG TGGCCAACTA ATTATCAATA CGGAAACGGT CATTGAATGG
CTACCAGTGC TTAAGGCATT TAAAACCATA TCACCTAATC CATTTGTAAA CCTTAAAGTA
AGAGTTAACA ATGATCCTTA TGGATTCTTT TCTAATATGC CGGAAGATTT TTACACTTGG
GAAGGTGTTT TTGGACAATA CAGTCGTGGT TACTCTGAGC CTCCCGAAAA CGCCGTCTAT
CTGACTCATG TAGGCTGTGG TGAAGATCCC AAGCCTTCTG ACTGGATGTG GCAATATCCA
ACAGATGATG GCCGTGGTGG TAAAGTTGTG GTGCACAATG GCGATGACTA TCATCGTTAT
CCCGATCACG GGATACACAA AAATACATTA TTACGTGATA TATGCCTTGG ATTAATTAAA
AACCGTAACC GAACAATTGT TAACGTTTAA
|
|---|
| Protein sequence | MKKIGYITWG CGSQVLSFRD YSHWIDDLIY VHELPKINLN QYAAVIIACH TNGEFIAQHA
EQINQYVRDG GFLIAFPVRG IDQWLDVVDV KWEDKRIEDW LWWTKSDGYI ELYQPTRDHS
LFDFVNIEDM KWHWHGVFAC GHTGLSLLNT ENAHDSLIVD FPNLPNNGRV LLTTLDPHSH
NGQRFMPAAT RFVTGFYPWL NCELSIDREV IPDFNVTYLS SSDIPTENEP PYLAATFDNT
PGNINFKSIY ELQDHIWLSD VLIVPRICDQ FYLRTLQDKF MNYLAKGGQL IINTETVIEW
LPVLKAFKTI SPNPFVNLKV RVNNDPYGFF SNMPEDFYTW EGVFGQYSRG YSEPPENAVY
LTHVGCGEDP KPSDWMWQYP TDDGRGGKVV VHNGDDYHRY PDHGIHKNTL LRDICLGLIK
NRNRTIVNV
|
|---|
| |