Gene VSAL_II1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II1080 
Symbol 
ID6962462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand- 
Start bp1176491 
End bp1177060 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content42% 
IMG OID643382320 
Productmembrane protein 
Protein accessionYP_002265351 
Protein GI209809812 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG TCGTGAGTGT ACTAGCCATA TCAATAACCA CCGTCGCCTT AGCGGAAATC 
GGTGATAAAA CCCAACTCCT CTCTTTACTG CTTGCCAGTA GATACCGAAA ACCAATCCCT 
ATTATTGCTG CGATCTTTTT TGCAACTCTG TTAAACCACA CCTTAGCCGC CTATTTAGGG 
GTTGTCGTTG CCGATTACCT AACACCTGAA ACCTTAAAGT GGGCTCTAAT TATCAGCTTT 
GTCATAATGG CTGGTTGGGT CTTGATCCCA GATAAATTGG ATGATGACGA AAAAATCTCA 
AACCGAGGTC CTTTTGTTGC CAGTTTCATT GCCTTTTTCA TTGCTGAAAT TGGGGACAAA 
ACTCAAATAG CCACTTCCAT TTTAGGCGCT CAAAATGCCG ATGCCCTTAG TTGGGTTATT 
CTGGGTACGA CAATAGGTAT GTTATTGGCG AATGTGCCCG TTGTTCTAAT TGGTAAATTT 
TCTGCTGATA AGTTGCCATT AACCTTAATT CACCGCGTAA CGGCAGTGAT TTTCTTAGGG 
TTAGCCGTAG GCACTTTCTT TGGTATGTAA
 
Protein sequence
MSNVVSVLAI SITTVALAEI GDKTQLLSLL LASRYRKPIP IIAAIFFATL LNHTLAAYLG 
VVVADYLTPE TLKWALIISF VIMAGWVLIP DKLDDDEKIS NRGPFVASFI AFFIAEIGDK 
TQIATSILGA QNADALSWVI LGTTIGMLLA NVPVVLIGKF SADKLPLTLI HRVTAVIFLG 
LAVGTFFGM