| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1079 |
|---|
| Symbol | frp |
|---|
| ID | 6962387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 1175573 |
|---|
| End bp | 1176295 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643382319 |
|---|
| Product | nitroreductase A |
|---|
| Protein accession | YP_002265350 |
|---|
| Protein GI | 209809811 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAG TTATCAACAC TATTTTAGAT CACCGTTCAA TCCGTGTTTT TACCAATGAC
CCTATTTCTA AAGTGCAATT AGATACCATC ATTAGCGCAG GAATTGCCGC CTCTTCGTCA
AGCTTACTTC AAGTAAACTC AATTATTCGT ATCACTGATA TGGAAAAGAG AAAAGCACTA
GTTGAACTTT CTGGCGGCCA GCCTTATGTT GAAGGTGCCG CTGAGTTTCT GGTTTTTTGT
ATTGATTTTC AACGTCATCA TGAAATGAAT CCTGACGTAA AAGCTGAATA TACAGAGCTA
ACACTGATTG GTGCTGTCGA TGCAGGAATA ATGGCACAAA ACTGCTTACT CGCGGCAGAA
TCAATGGGCT TAGGTGGCGT GTATATTGGC GGTTTACGAA CTCATGCTCA AGAAGTGGAC
GATTTACTTG AGTTGCCTCA ACACACTGCA GTGTTATTTG GCATGTGCTT AGGTCATCCC
GATCAAACGC CACAACAAAA ACCACTTTTA AGTCCTGAGG TTATTGTTCA TGAAAATACG
TACAAGCCAT TAGATAAAAA CAAAATCCAT GAATACGATG AAACCATGTT GCAGTATTAC
GCCACACGTA ACAGCAATCA AAAGCAAAGT TCATGGTCGG AGCAAATTAC AAGCAAGCTA
TCTCAAGAAT CACGCCCTCA CATTAAAGGG TACTTAAATA ACAAAGGTCT AGCGATTAAA
TAA
|
|---|
| Protein sequence | MNPVINTILD HRSIRVFTND PISKVQLDTI ISAGIAASSS SLLQVNSIIR ITDMEKRKAL
VELSGGQPYV EGAAEFLVFC IDFQRHHEMN PDVKAEYTEL TLIGAVDAGI MAQNCLLAAE
SMGLGGVYIG GLRTHAQEVD DLLELPQHTA VLFGMCLGHP DQTPQQKPLL SPEVIVHENT
YKPLDKNKIH EYDETMLQYY ATRNSNQKQS SWSEQITSKL SQESRPHIKG YLNNKGLAIK
|
|---|
| |