Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II1075 |
Symbol | |
ID | 6962384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 1170954 |
End bp | 1171997 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643382316 |
Product | putative iron transporter, membrane component |
Protein accession | YP_002265347 |
Protein GI | 209809808 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.803098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCAT TTTATCGATT AACGTCATTT CAAATATTGG TTTCAGTCAG CCTATTTATT GGGTTGTTTT TCACTTATCT AAGTGTCGGA GCTGTTCATA TTCCAATTAT AGATATACTT GCTATGTTTA AAAGCTATGT GCTTGGTGGC AGTGAATTGG CTGCGAAAGA GCATCCTTTG GCCTCTGCCA TTGTGTTGCA TATTCGATTA CCAAGAGCCT GTGCCGCAAT ATTAGCGGGT GGGGCATTGG CATTAGCGGG TGCATGTACG CAAGGCTTAT TTAAAAACCC ACTCGCGAGT CCTGATGTAT TGGGGGTCAG TTCGGGCAGC AGCTTTGGTG CAGTGGTTGC GATAGTGACG GGCTTTTCAT TTATGAACCC AATGTGGTTG CCAATTTTTA CCACGGTGGG TGCGTTGGCA GCATCCGCGT TTATTTATGT GTTGGCTTCA CGTCATTCAT CTTCTCAAAT TTTGTTTTTA ATCTTAACGG GGTTGGCATT ATCTAGCTTG CTTGGCGGAG CTAGAATGGG TCTGCTATTA ATGGCTCAAC AATACGAAGT TAGCCAATTT GTGTTTTGGG CAATGGGGGG CTTAGATGGG CGCATGTGGC AACATTTGTT ATGGCCTGCT CCCGTGATTA TTGTTGTGTC TATATTGCTG CTCAAAGAAA GTCGTTCATT GAATTTGTTA GCCTTGGGTG AAGAAAGTGC TCACGGAATG GGGTTAAACA TCAAGAAAAC ACGCTTTAAA TTATTGATGT TTGCAACGCT GCTTACCGCG ATGTCGATAG CGATTGCAGG GCCGATTGGA TTCATTGGGT TAATGGTGCC GCATTTGGTG CGTTTGCTTG TTGGCCCTGC TCATGAAAAG TTATTGCCAT TCTCAGCTAT CTTCGGTGTG ATTTTCTTAC TTGTGTGTGA TTTGTTAGGT CGCTGGATTA TCGCGCCAAA CGAATTAAAA GCGGGGATCA TTACCTCCTT CATTGGTGGT TGTTACTTCA TTGGCTTGAT TATTCGATTT CAAAGAAAGG GGCGTTTAGC ATGA
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Protein sequence | MMPFYRLTSF QILVSVSLFI GLFFTYLSVG AVHIPIIDIL AMFKSYVLGG SELAAKEHPL ASAIVLHIRL PRACAAILAG GALALAGACT QGLFKNPLAS PDVLGVSSGS SFGAVVAIVT GFSFMNPMWL PIFTTVGALA ASAFIYVLAS RHSSSQILFL ILTGLALSSL LGGARMGLLL MAQQYEVSQF VFWAMGGLDG RMWQHLLWPA PVIIVVSILL LKESRSLNLL ALGEESAHGM GLNIKKTRFK LLMFATLLTA MSIAIAGPIG FIGLMVPHLV RLLVGPAHEK LLPFSAIFGV IFLLVCDLLG RWIIAPNELK AGIITSFIGG CYFIGLIIRF QRKGRLA
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