| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1070 |
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| Symbol | |
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| ID | 6962379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1165426 |
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| End bp | 1166634 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643382311 |
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| Product | MFS transporter |
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| Protein accession | YP_002265342 |
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| Protein GI | 209809803 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATCA CTAAGATGAT TGAATTTCGC AGTCGAGCGT ATTATCAAGT AAGTGCCGCA
TTGGCCTTTG GTTCGTTTTT GGTGTTTTGT AATTTGTATT TGTTTCAACC AATGCTTCCT
GCACTGGCGG ATCATTTTGC GGTATCTGCA ACTAAAATTA ACGGGCTACT TGCCGCTGGA
ACATTCACTC TTGCGTTAAT GCTACTGCCT TGGGCTATTG CTTCTGAGAT GATAGGGCGT
CGAAAAATCC TATTAATCAG TCTATTTTTA TTGCCAGTGA TCGGATTAAC GCCATTACTA
ACGAACAGCC TAATGTTGTT GATTATTAGT CGGGGGTTAA TGGGGATGGC ATTGGCAGGT
TTTGCTGCGG TAGCGGTGGC TTATATGGCA GAAGAGTTTT CGGCCAAAGC ATTCAGTCAT
GCCATTGGTG CTTACATTAG TGCAAATTCT TTAGGTGGGA TCTCTGGTCG TATTTTTGGA
GGCATGGTTA CCGACCATTT TGATTGGCAA ACTGCTGTGT TTTGCATGGC GGTACTCAGT
TTAGTGGGGG CTATCATCGT GGCGCTTGTA CTTCCGAAGA AAGAGAAACC ACGAGATAAT
GCGCCTTCGT TATCTCAATA TCATCGAATT ATCTTTCAAC ATTTAAGAAA TAAGAAAATC
TTGTTTGCGA TGCTCATTGG TGGCGTTAAT TTCGCTTTGT TTGTGAATTT ATACACCGTA
ACAGGGTTTC GATTGGTAGC CGAACCTTAC TCTTTGCCAA TCAGTATCGC TTCTATGATT
TTCTTGTGCT ATTTGTCTGG CACGATCAGC TCAAGACTGG TTGGAATGTG GTGTCACCGT
TTTAGTGCGG TATCTGGGAT GTTTCTTGGT TCGTTGATCA GTTTATGTGG GATGTTAATT
GCAAGTAATA GCTCATTAGT TGTGATTCTA ATTGGTTTGA ATGTATTAAG TTTTGGTGCT
TTTTTTACAC ATTCGTTGGC GTATGGGTGG GTGAGTCAGC AAGCAGTAAC GGCTAAATCG
ACAGCGACGG CGTTATATCT GGTTCATTAT TATGTGAGCG GGAGCCTTGG TGGATTCTAT
TTGATGTATT GTTGGCAGCA CGGTGGTTGG GATAGGGTTA TTTTTGGCGC AGGTGCATTG
TATAGCGTGA TATTTTGGTT ATGTTGGCGT TTGTATCACC ACACCCATAC CAAGGCGGCA
TGGGCATAG
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| Protein sequence | MMITKMIEFR SRAYYQVSAA LAFGSFLVFC NLYLFQPMLP ALADHFAVSA TKINGLLAAG
TFTLALMLLP WAIASEMIGR RKILLISLFL LPVIGLTPLL TNSLMLLIIS RGLMGMALAG
FAAVAVAYMA EEFSAKAFSH AIGAYISANS LGGISGRIFG GMVTDHFDWQ TAVFCMAVLS
LVGAIIVALV LPKKEKPRDN APSLSQYHRI IFQHLRNKKI LFAMLIGGVN FALFVNLYTV
TGFRLVAEPY SLPISIASMI FLCYLSGTIS SRLVGMWCHR FSAVSGMFLG SLISLCGMLI
ASNSSLVVIL IGLNVLSFGA FFTHSLAYGW VSQQAVTAKS TATALYLVHY YVSGSLGGFY
LMYCWQHGGW DRVIFGAGAL YSVIFWLCWR LYHHTHTKAA WA
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