Gene VSAL_II1064 details

Gene Information

• Locus tag: VSAL_II1064
• ID: 6962375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 1158280
• End bp: 1158846
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643382306
• Product: transposase
• Protein accession: YP_002265337
• Protein GI: 209809798

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.87697
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTCA ATAATTTCAG TAATATATTG AATTCATTGA TTGAAATGGA ACGTACGAAT 
AAATGTGAAC TCTTTTATTT TGATGAGTCA GGCTTTAGTC AGAAATCTAA TCTTCCTTAT 
TGTTGGGGAC CTATCGGTGT TCAATCGCTA AGGCCTGCTC ATTCACACAG CAAACGGCTC 
AATGTTCTTG GCTTCTTAAG TAGACAAGGT AAATTGAGTT TTCAAACAAC GGAAGGAAGA 
GTAACTACCG ATACAGTAAT TGATGCATTT GAGCACTTTA TCAACGCACG AAAAAACGAT 
AAGCCATGCT TTATTATCTT AGATAATGCC TCTTTTCATA GGTCAGCAAA ATTTAAACAA 
AAATTGCATG AGTGGTTGAT GAATGATGTA TTAGTTTGTT ATCTACCACC GTACTCTCCA 
GAGCTCAATA TCATTGAGAT ATTGTGGAAG AAAGTAAAAT ATGAATGGTT ACCATGTGAA 
GCGTTCAAAA CGTTTGAAGA CCTCAGTATT AACATCAAAA ACATATTAAA TTATTACGGC 
GAAAAATTCA CAATAACTTT TGCGTGA 

 

Protein sequence

MKFNNFSNIL NSLIEMERTN KCELFYFDES GFSQKSNLPY CWGPIGVQSL RPAHSHSKRL 
NVLGFLSRQG KLSFQTTEGR VTTDTVIDAF EHFINARKND KPCFIILDNA SFHRSAKFKQ 
KLHEWLMNDV LVCYLPPYSP ELNIIEILWK KVKYEWLPCE AFKTFEDLSI NIKNILNYYG 
EKFTITFA