| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1041 |
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| Symbol | |
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| ID | 6962352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1137283 |
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| End bp | 1137870 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382288 |
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| Product | transmembrane transporter protein, LysE type translocator |
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| Protein accession | YP_002265319 |
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| Protein GI | 209809780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATACT CGCATCTACT TGCTTTAATC GCTTTTGCCT TTGTTGGCGC TTTCACCCCT
GGCCCGAATA ACATCATGCT AATGACCTCT GGTGCGAATG TTGGTTTTGT TCGTACTATT
CCACATATGC TCGGTGTTAT TTTGGGTTTT GCTTTTATGC TGGTGTTGGT TGGGTTGGGA
TTACTTCAGT TTTTTCAAAC GTATCCACAA TTAGAGAAAG TATTGCAGGT TGTTAGTGCA
ATTTATTTAC TTTATCTCGC GTACAAAATA GCAACAAGCG AACCGGTTAA TAGTATTAAT
GGGGACTACA AACCAATGTC GTTTTTAAGT GCGGCCAGCT TTCAATGGGT AAACCCAAAA
GGGTGGTCGA TGGCATTGTC GGTAATGAGT GTTTATGCTT CTAGCTCAGA TATATTCAGT
GTTTTTTTAA TCGCATTTGT GTTCATTTGT ATTAACGTTC CAACCGTTAG TTTTTGGACT
GCGGCGGGAA AACAATTGCA GAAACGATTA ACTAAACCAA GCCACCTTAA AGTCTTTAAT
TACAGCATGG CTGGTCTATT AGTAGGGTCA ATGGTGATTG GTTTTTAA
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| Protein sequence | MEYSHLLALI AFAFVGAFTP GPNNIMLMTS GANVGFVRTI PHMLGVILGF AFMLVLVGLG
LLQFFQTYPQ LEKVLQVVSA IYLLYLAYKI ATSEPVNSIN GDYKPMSFLS AASFQWVNPK
GWSMALSVMS VYASSSDIFS VFLIAFVFIC INVPTVSFWT AAGKQLQKRL TKPSHLKVFN
YSMAGLLVGS MVIGF
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