| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1030 |
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| Symbol | |
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| ID | 6962342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1128401 |
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| End bp | 1129189 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382278 |
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| Product | binding-protein-dependent transport system,inner membrane component |
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| Protein accession | YP_002265309 |
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| Protein GI | 209809770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACG TTAACGCCAC CTTTCACAAA TCAGTCGTTT ATTCTATTGT CGGTATCATG
ATGATCCCAA TTATTGCGAC GTTTGTGTAC TCGATGTCTT CACGCTGGGG GGCGAAAATC
CTTCCAGATG GATTCACTTT GAACTGGTAT GGACAACTAT TAACAGACGA GCGTTTCATC
GCTGCATTTG GGCGTTCATT ATTTATTGGT CTCGCCTCAT TAACGTTGAG TGTTGTACTG
ATTATTCCCG CTATTTTTGT CGTATTTTAT TACTTCCCAA AACTCGATAA AGTGATGAAC
ATTCTCATTC TATTACCCTT TGCGGTTCCA CCTGTCGTGT CATCCGTTGG GTTATTGCAA
ATCTATGCTG ACAGTAGTAT CCCTTTAGTT GGAACACCCT GGATACTCAT CGGAACCTAT
TTCACTATTG CATTACCATT TATGTACCGC GCTGTCGCAA ATAGTTTTGA AGCCATCAAT
TTACACGATC TAATGGATGC AGCTCATTTA CTAGGAGCAA GTACAACCAA AGCGTTTCTC
TTGATCATTC TTCCGAATTT AAGGAAAGGA TTAATGGCAT CACTCTTCTT ATCCTTTTCA
TTTTTACTGG GTGAATTTGT GTTTGCCAAC ATCTTAGTCG GCACGCGTTA TGAAACTCTG
CAAATCTACC TCTATAACAT GCGACAAACG AGCGGACACT TTACGTCTGC ATTAGTAATG
ACCTATTTCT TATTCATCTT TTTACTGACT TGGCTAGCAA GTCGTTTTAG CCAAGGGATC
AAATCATGA
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| Protein sequence | MQNVNATFHK SVVYSIVGIM MIPIIATFVY SMSSRWGAKI LPDGFTLNWY GQLLTDERFI
AAFGRSLFIG LASLTLSVVL IIPAIFVVFY YFPKLDKVMN ILILLPFAVP PVVSSVGLLQ
IYADSSIPLV GTPWILIGTY FTIALPFMYR AVANSFEAIN LHDLMDAAHL LGASTTKAFL
LIILPNLRKG LMASLFLSFS FLLGEFVFAN ILVGTRYETL QIYLYNMRQT SGHFTSALVM
TYFLFIFLLT WLASRFSQGI KS
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