| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1025 |
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| Symbol | |
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| ID | 6962337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1123301 |
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| End bp | 1124218 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382273 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002265304 |
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| Protein GI | 209809765 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA AACAATCACT CTTAACCAAC TTGTATACCT TCAATATAGC GGCAAAAAGT
TTGAGCTTCA CTTTAGCCAG TGAGCAACTT TTTTTAACCC AAGGAGCGGT AAGCCAGAGA
ATCAAACAAC TTGAAGAGCA ATTAGGTTTT AATTTATTTA TTCGTCTCAC TCGTAAATTA
GAGCTTACAG AAGAAGGGAA ACGTTTGTGG GATGTGCTTG ATACATCTCT TGAAGCCATC
TTCTCCGAAA TAGAAGATAT TCAATTTAAT GAACTCAGCG GAGAGCTTTA TATCGGAGTT
GCTCCCACCT TCGCTCAATC ATGGTTAATG CCCAGATTGC CTGAGTTTCA AGCTCTATAC
CCAAACCTTG ATTTAAAAAT CCGAGTAAAA GCAAGCCCGC TCGATTTTAA ACATGAACCG
GTCGATCTCG CTATTTATTA CAGTAATGGG CTTCATCCAG ATTTACATTG TGAAAAGTTA
TTTGACGAAT ATTTAACACC AATTTGCACC CCAGAATATG TAAATAAACT ACCAAAAGAC
GTATTCAATA TTGATGCCGT TTGTTTAATT CATTGTACTG AATCGTTAGA GTCTATTCGC
ACTGATTTTG AATGGACATA TTGGTTATCT ATGACAAATA ACCCAACACC AGTTCAATCA
AATAACTATG TCTTTAATCA TTCTGAAATG GCGATATCCG CCGTTAGAAA TGGAATGGGA
ATTGGTATAG CAAGAACACG CCTAGTCGAT ACTTACCTTA ACAATGGGGA ATTAGTGACT
CCTTTCGAAG CGATCCCATC CAATTTAAGC TATAACTTAA TTTGCCCAAA AGGACAAGAA
TTACGCCCTA AATATCAAGC ATTTACTCGC TGGTTACGAA CTAAAATAGA CCAACAAGCA
AAGTCTTCAT CATCTTAA
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| Protein sequence | MNNKQSLLTN LYTFNIAAKS LSFTLASEQL FLTQGAVSQR IKQLEEQLGF NLFIRLTRKL
ELTEEGKRLW DVLDTSLEAI FSEIEDIQFN ELSGELYIGV APTFAQSWLM PRLPEFQALY
PNLDLKIRVK ASPLDFKHEP VDLAIYYSNG LHPDLHCEKL FDEYLTPICT PEYVNKLPKD
VFNIDAVCLI HCTESLESIR TDFEWTYWLS MTNNPTPVQS NNYVFNHSEM AISAVRNGMG
IGIARTRLVD TYLNNGELVT PFEAIPSNLS YNLICPKGQE LRPKYQAFTR WLRTKIDQQA
KSSSS
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