| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1002 |
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| Symbol | |
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| ID | 6962314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1098951 |
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| End bp | 1100453 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643382254 |
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| Product | sodium/proton-dependent alanine carrier protein |
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| Protein accession | YP_002265285 |
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| Protein GI | 209809746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGTA TCGTTGATTT TCTTAATAGC ATCATCTGGA GCCCGGTCTT GATTTACCTG
TGTTTGGGGT CTGGTTTGTT TTATTCTATT CAAACTCGAT TCGTTCAAGT TCGACATTTT
AAAGAGATGT GTCGTTTGTT GGTATCGAAC AAAGAATCAA GTAAAGGGAT CAGTTCATTC
CAAGCATTAG CCGTTTCATT ATCTGGCCGT GTTGGTACGG GGAATATCGC AGGGGTTGCT
GCGGCGATCG GTTTTGGTGG CCCAGGTGCT ATATTCTGGA TGTGGGTAGT GGCTTTCTTA
GGCGCGGCAA CCGCGTATGT AGAATCAACC CTTGCTCAAA TTTATAAAGA AGAAGATGAA
GGCCAGTTCC GTGGTGGTCC AGCTTACTAT ATTGAAAAAG CGATGGGTCA AAAATGGTAC
GCGTGGATAT TTGCTATCGC GACGATTTTT GCGTGTGGTG TGTTACTTCC GGGTGTGCAA
TCAAACAGTA TCGGTAATGC GGTTGAAACT GCATTTGGTA CGGGTGGTAT GATTGACACG
GGTATTGGCG TGTTCAGTTT TGCGAAAATT TTCACTGGTG CGGTTATCTC AGTGATTCTT
GGTTTCATCA TTTTTGGTGG CGTTAAGCGT ATCGCGCATT TCACTCAAAT TGTCGTGCCA
TTCATGGCAT TGGCTTATAT TATTTTAGCG TTTGTTATCA TCCTTCTTAA TATCAGCGAA
GTGCCAGCCA TTTTCAGTAT GATTATTGGT GATGCATTTA CCCCAATGGC AGGCTTTGGT
GCCGCAATTG GTTGGGGTGT TAAGCGTGGT GTTTATTCTA ACGAAGCCGG TCAGGGTACA
GGTCCTCATG CGGCAGCCGC TGCAAGTGTT GAACATCCTG CTCAGCAAGG GCTAGTGCAA
TCGTTTTCAA TCTACATTGA TACATTGTTA GTGTGTTCTG CAACAGCATT TATGATTCTA
ATTACGGGAA CTTATAATGT TCAGGGCAGT GGCGAAGGTG TTTTCTTAGT ACAGAATATT
TCTGAGACGA TTGGGGCAAA TGGCCCTATG TTTACCCAAC TCGCGATTGA AAGTACGTTA
CCGGGTATTG GTAAAATCTT CATTGCATTT GCGTTGTTCT TCTTTGCTTT TACAACGATT
CTTGCTTATT ACTACATTGC AGAAACCAAC ATCGCTTACA TTCGTCGTAC CGTTAAGGTT
GATGGCATGA TGTTTATCCT GAAATTGGTG ATTATGTCTG CGGTCTTCTA TGGCACGATT
AAAACTGCCA ATATGGCGTG GGCAATGGGG GATATTGGCG TAGGTTTAAT GGCATGGCTG
AATATCATTG GTATTTTGAT TATCTTCTTT ATGTCTAAAC CTGCACTAAA AGCGTTGAAA
GATTATGAAG ATCAGCAACG ACGAGGGGTG ACGACCTACA CGTTTAACCC TGTTAAATTA
GGGATTAAAG GCGCAACGTA TTGGGAAGGG AAGTGGAAAA GAGACCAAGC AAAAAAGAAA
TAA
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| Protein sequence | MQGIVDFLNS IIWSPVLIYL CLGSGLFYSI QTRFVQVRHF KEMCRLLVSN KESSKGISSF
QALAVSLSGR VGTGNIAGVA AAIGFGGPGA IFWMWVVAFL GAATAYVEST LAQIYKEEDE
GQFRGGPAYY IEKAMGQKWY AWIFAIATIF ACGVLLPGVQ SNSIGNAVET AFGTGGMIDT
GIGVFSFAKI FTGAVISVIL GFIIFGGVKR IAHFTQIVVP FMALAYIILA FVIILLNISE
VPAIFSMIIG DAFTPMAGFG AAIGWGVKRG VYSNEAGQGT GPHAAAAASV EHPAQQGLVQ
SFSIYIDTLL VCSATAFMIL ITGTYNVQGS GEGVFLVQNI SETIGANGPM FTQLAIESTL
PGIGKIFIAF ALFFFAFTTI LAYYYIAETN IAYIRRTVKV DGMMFILKLV IMSAVFYGTI
KTANMAWAMG DIGVGLMAWL NIIGILIIFF MSKPALKALK DYEDQQRRGV TTYTFNPVKL
GIKGATYWEG KWKRDQAKKK
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