Gene VSAL_II0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0996 
Symbol 
ID6962308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp1090210 
End bp1090641 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID643382249 
ProductPTS system, permease-specific phosphorylation site EIIA component 
Protein accessionYP_002265280 
Protein GI209809741 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTA CATTAGTGAA TACAGACTTA ATTAAACTTA ATTTAGATGC AACTACAAAA 
GAAGGTGTAT TTTCTGAATT AGCTGAAATG CTATTTAAAA ACAACAGAAT TAATAATAAA
GAAAACTTTT TAGAAGGTAT TCAGGCTCGC GAATCTCAAT GTGTTACTTC TGATATGGGT
ATAGCGTACC CTCATGCGAA ACATTCTGCG GTTATTACTC CTGCGATTGC CATCGGCGTA
TCAAAAGCAG CGATTGAATA CGATGCTGAA GACGACCAAC CTACGGTATT TTTCATGATT
GCATCACCAG AAAGCGGTGA TCACCACATT TATGCTCTAC AAGCTTTGTT TGAAAAATTT
GGCGATGACC TAATTGCCGA CATGCACAAG GCGACAACGG AACAAGAAAT TTTAGACCTA
CTGACTAATT AA
 
Protein sequence
MITTLVNTDL IKLNLDATTK EGVFSELAEM LFKNNRINNK ENFLEGIQAR ESQCVTSDMG 
IAYPHAKHSA VITPAIAIGV SKAAIEYDAE DDQPTVFFMI ASPESGDHHI YALQALFEKF
GDDLIADMHK ATTEQEILDL LTN