| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0995 |
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| Symbol | |
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| ID | 6962307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1088783 |
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| End bp | 1090186 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643382248 |
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| Product | PTS system, fructose-like permease IIC component |
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| Protein accession | YP_002265279 |
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| Protein GI | 209809740 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGA TGACTGCAAC GCAAAGTCCA AGTGATTGGA AAAAAACATT GTCTACCCTT
AAAGGGCACT TACTTTTTGG TACGTCTCAC ATGCTTCCAT TCGTGGTTGC TGGTGGGGTT
TTATTAGCGC TAACGGTAAT GGCAACAGGT AAAGGCGCGG TTCCTGATAC AGGTGTTCTG
GCTGATATTT CGACTATTGC TATTAAAGGT TTAGTTCTTT TTCCAATCAT CCTTGGTGGT
TTTATTGGCT ACTCAATTGC TGATAAACCT GCACTAGCTC CTGCTTTTAT TGCATCAGGT
ATCATGGCTG ATTTAGGGGG TGGTTTCCTT GGTTGTATCG TTGCAGGCTT CATCGCTGGT
GGTGTGGTTC TTCAACTTAA GAAGCTTCCT ATTCCTGCGC ATCTAAGTGC ATTAGGGGTT
TACTTTATCT ACCCTCTAGT TGGTACATTG GTATCTGCGG GTATAGTAAT GTGGGGCCTA
GGCGCAGCTA TCTCTTCATT CATGATCGTG ATGAACGAAT TCTTAGCATC AATGGCGGGT
TCTTCTAAAG TGGTTCTTGG TGCGATTCTT GGTGGCATGA CGGCATTTGA TATGGGTGGC
CCAATCAATA AAGTGGCAAC CTTGTTCGCT CAAACTCAAG TAAACACACA ACCATGGTTG
ATGGGTGGTG TTGGTATCGC GATTTGTACT CCGCCGCTAG GTATGGCACT TGCTACTTTC
ATGTTTAAGA AGAAATTCTC TAAAGAAGAG CAAGAAGCAG GTAAAGCAGC AGCAATCATG
GGTTCAATTG GTATTTCTGA GGGTGCTATC CCATTCGCTG CAAATGATCC AATGCGTGTT
CTTCCGTCTA TTGTTGCTGG TGGTATGGTG GGTTGTGTGT TCGGCTTTAT GACTGATGTT
TTACTTCACG CACCTTGGGG GGGATTAATT ACAGCACCTG TCTCTAGCAA CATCCCAATG
TACGTAGTTG GTATTGTTTT AGGCTCACTA ACAACGGCAT TAATTGTTGG CTTCTGGAAG
CCAGTTTATG TTGAAGAGAA TGAAACCGTT GCAGCAGCTC CAGTACAAGC ACAAACAGCG
ACACCAGTTG CTGGTGAAGG CGAGTACGAT GTTCTTGCAG TTACTTGTTG TCCTTCAGGT
GTTGCTCACA CATTTATGGC AGCAAAAGCG CTAGAAAAAG CGGGTGCAGC AGCAGGTATC
AAGATTAAAG TTGAGACACA AGGTTCTAAT GGTTTAATGA ATAAACTGAC GGCAAAAGAT
GTTGCGAACG CGAAGTTCAT CATCCTTGCT CACGATATTC CAGTAAAAGA AGGCGAGCGT
TTCACGAATA TTCGCCAAGT TGAATGTTCA ACGAAAGGTG CGATGAAAAC AGCCTTATCA
TTGATTCAAG ATAATTTAAA ATAA
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| Protein sequence | MSTMTATQSP SDWKKTLSTL KGHLLFGTSH MLPFVVAGGV LLALTVMATG KGAVPDTGVL
ADISTIAIKG LVLFPIILGG FIGYSIADKP ALAPAFIASG IMADLGGGFL GCIVAGFIAG
GVVLQLKKLP IPAHLSALGV YFIYPLVGTL VSAGIVMWGL GAAISSFMIV MNEFLASMAG
SSKVVLGAIL GGMTAFDMGG PINKVATLFA QTQVNTQPWL MGGVGIAICT PPLGMALATF
MFKKKFSKEE QEAGKAAAIM GSIGISEGAI PFAANDPMRV LPSIVAGGMV GCVFGFMTDV
LLHAPWGGLI TAPVSSNIPM YVVGIVLGSL TTALIVGFWK PVYVEENETV AAAPVQAQTA
TPVAGEGEYD VLAVTCCPSG VAHTFMAAKA LEKAGAAAGI KIKVETQGSN GLMNKLTAKD
VANAKFIILA HDIPVKEGER FTNIRQVECS TKGAMKTALS LIQDNLK
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