| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0985 |
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| Symbol | |
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| ID | 6962297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1076165 |
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| End bp | 1077121 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382240 |
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| Product | membrane transport protein, putative auxin efflux carrier |
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| Protein accession | YP_002265271 |
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| Protein GI | 209809732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.34086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATT TAATCACTCA ACTGCTATTT TCAGCATCAA TTACAGGCCC TATATGCTTA
ATGCTGTTTC TTGGTGTTGT ACTGAAACGC ATTCACTTAA TTAACGACAA CTTTATTGAA
GTCGCTTCTA AGCTCGTATT TCAAGTCACC TTACCCGCGA TGCTCTTTTT AAGCATCGTA
AATTCTGATC ATGATTTCTC ATCCAGTAGC CGTTTAATTA TTTATGGTCT TATTGCAAAC
GTTGCTTTCT TCTTATTCAC CACCTTTTCA ACTAAGCTCG TTTTTAAGGA TAAGCAAGAT
CACGGCGTTA TTATTCAAGG CGGGTTTCGT GCAAACACAG CCATCATTGC ACTGGCTTAT
GTTGCTAACG CTTATGGTGA TTCTGGCGTT GCTTTAGCCG CTATTTATGT CGCATCAACT
ACTGTGCTCT ATAATATTCA GGCCGTTATT GCCTTAACAC CAAAAGAAGA GCATAACGAA
AAACAAGCGT TTGGGGTGAT AATTAAAACA CTCACTAAAA ATCCGTTAAT TATTGCGATT
CTATTGGGCG TTGTGTGTTC ATTTCTCTCA ATTCCAATCC CTGAGATGGT CACTCAAGCA
GGGCAATACT TCGCAAACAT GACACTGCCT TTGGCATTAT TGTGTGCGGG GGGGTCGCTA
AACTTAAGCT CAATGAAAAA AGACAATGGC CCTACGTGGT TTGCTACTAG CTATAAACTT
ATATTAAGTC CCTTTCTAAT TACCGCAGGT GGCATCATGT TTGGCTTTAG AGGATTGGAT
TTAGGTTTGC TATTCTTTAT GAGTGCCGCG CCAACCGCAG CGGCCAGTTA TGTAATGGCA
AGAGCCATGG GAGGGAATGC AACATTAGCG GCGAATATCA TTGCCCAAAC AACCGTTGCT
TCATTAGTCA CTTGTACGGT AGGAATATTT ATTTTGTCTT CATTTAGTTT GATTTAA
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| Protein sequence | MDNLITQLLF SASITGPICL MLFLGVVLKR IHLINDNFIE VASKLVFQVT LPAMLFLSIV
NSDHDFSSSS RLIIYGLIAN VAFFLFTTFS TKLVFKDKQD HGVIIQGGFR ANTAIIALAY
VANAYGDSGV ALAAIYVAST TVLYNIQAVI ALTPKEEHNE KQAFGVIIKT LTKNPLIIAI
LLGVVCSFLS IPIPEMVTQA GQYFANMTLP LALLCAGGSL NLSSMKKDNG PTWFATSYKL
ILSPFLITAG GIMFGFRGLD LGLLFFMSAA PTAAASYVMA RAMGGNATLA ANIIAQTTVA
SLVTCTVGIF ILSSFSLI
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