| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0983 |
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| Symbol | |
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| ID | 6962295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1073892 |
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| End bp | 1074794 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643382238 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002265269 |
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| Protein GI | 209809730 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA ATCATTTAAA TTGCTTGAAA GCGTTTGAAG CCTCTGCTCG TCACTTGAGC
TTTTCTTTAG CGGCAAAAGA ATTGAATGTC ACGCCTGCTG CCATTGGCCA ACAAGTGAAA
TTGTTAGAAG AATGGCTAGG GATCTCTTTG TTTGAGAGGC GCTCCTCTGG GGTATCACGG
TTAGCATTAA CCAAAGAAGC CTTGCAGGGC TTACCTGAAA TTACTCGTGG TTTTGAGCAT
TTATCTCAAG GATTAGCTTT ATTAAAGCCA GCTGAAGTGA ATACTATTTT AACCGTGGCA
GTCAGCCCTG CGTTTGCCGC GAAATGGTTA TTAATGCGCA TTGATGACTT CCAAACATTG
CATCCTGAAT GGGATCTGAG ATTAGATACC AATATTAGAA CCGTTGATTA CCTTGCCGAG
AGCATTGATA TTGGTGTTCG TTATGGTAAA GGGGAGTGGG AAGGGTTAGA TAATATCTTG
TTAATGACCG AGTCTGTTTT TCCGGTCTGT TCTCCTGAGT TGTTAAAGAA AGGATTGAAT
AGCGTGGAAT CATTGGTTGA TTTTCCATTA CTGCATGATC TTTCTTTACC TAAAGAGAGT
GGCTTTCCTT CGTGGAGTGG TTGGTTTGAA CAGAATGAAA TTTACAATGT AAATACAGAT
AAAGGATTGA AGATAAACAA TTCCGCCTCT GTTATTCAGG CAGCGATAAG TGGACAAGGC
GTGGCATTAG GTCGAAGTGT GTTGGTACAA GAGGATCTGG ACGGGGGGCG TTTAGTTCAG
CCTTTTCCTG AGTTGCAATG TAATATTGAA TTAGCTTATT ACATCGTTTG GAAACCGAGT
ACAGTGTCTA ATGAAAAGGT TGCGGTATTT AAGCGTTGGT TATTAGCTCA AGTTGCGACA
TAG
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| Protein sequence | MKLNHLNCLK AFEASARHLS FSLAAKELNV TPAAIGQQVK LLEEWLGISL FERRSSGVSR
LALTKEALQG LPEITRGFEH LSQGLALLKP AEVNTILTVA VSPAFAAKWL LMRIDDFQTL
HPEWDLRLDT NIRTVDYLAE SIDIGVRYGK GEWEGLDNIL LMTESVFPVC SPELLKKGLN
SVESLVDFPL LHDLSLPKES GFPSWSGWFE QNEIYNVNTD KGLKINNSAS VIQAAISGQG
VALGRSVLVQ EDLDGGRLVQ PFPELQCNIE LAYYIVWKPS TVSNEKVAVF KRWLLAQVAT
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