Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0980 |
Symbol | |
ID | 6962292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 1071202 |
End bp | 1071921 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643382235 |
Product | putative exported oxidoreductase |
Protein accession | YP_002265266 |
Protein GI | 209809727 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA AACTGTCCAA TAAAACTATC TTAATTACAG GTGCAAGTAG AGGCCTTGGT AAAACAATTG CGTTGGCTCT GGGAGAGCAA GGCGCTGAGT TGATTTTACA TGCGAGAAAA ATGGAACAAT TATTAGAGCT AAAGTCTACA TTTTTAACTC TTGGTTATAA AGAACCTACA TTAGTGATAC TCGATTTATT AGACGCGGAA CCTCAAGATT ATGAAGCATT AGGTCGGAGC ATAAAATTAA ATCATACCCA TATTGATGGT GTGATTTTTA ATGCTGCATT GTTCCATGGG TTACGTAACG TGACCTCTAT GCCTATTTCG GATCTTGATG CTTCATATCG AGTAAATCTT AGAGCTAATG TTTTATTAAC AAACGTATTA TTACCATTAA TACGTCTTAG TAAAGGGCGA TTACTTTATA CGTCATCAAT TGTTGGGCAT GAAGCGTGGC CAGGTTGGAG CGATTACTGT ATCACTAAGT TTGCGTTAGA AAGTTATAGT CAATTAGTTG CAATAGAAAA TAAAAATGAG TTATTTGTTA ATTGTATAGA CCCCGGTAAG CTTCGTACTG AAATGAGAGT AAAAGCGTTT CCTAATGAAG ATCCTATGAG TTTACCTACG CCAGAAGAAT TAATGCCTCT TTATGTCGAT TTAATGTCTA TAAGTTCTCT TCATGGACAG GTAATTGATG GCCGAGATTA TCTAAAATAA
|
Protein sequence | MKNKLSNKTI LITGASRGLG KTIALALGEQ GAELILHARK MEQLLELKST FLTLGYKEPT LVILDLLDAE PQDYEALGRS IKLNHTHIDG VIFNAALFHG LRNVTSMPIS DLDASYRVNL RANVLLTNVL LPLIRLSKGR LLYTSSIVGH EAWPGWSDYC ITKFALESYS QLVAIENKNE LFVNCIDPGK LRTEMRVKAF PNEDPMSLPT PEELMPLYVD LMSISSLHGQ VIDGRDYLK
|
| |