Gene VSAL_II0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0980 
Symbol 
ID6962292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp1071202 
End bp1071921 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content35% 
IMG OID643382235 
Productputative exported oxidoreductase 
Protein accessionYP_002265266 
Protein GI209809727 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AACTGTCCAA TAAAACTATC TTAATTACAG GTGCAAGTAG AGGCCTTGGT 
AAAACAATTG CGTTGGCTCT GGGAGAGCAA GGCGCTGAGT TGATTTTACA TGCGAGAAAA
ATGGAACAAT TATTAGAGCT AAAGTCTACA TTTTTAACTC TTGGTTATAA AGAACCTACA
TTAGTGATAC TCGATTTATT AGACGCGGAA CCTCAAGATT ATGAAGCATT AGGTCGGAGC
ATAAAATTAA ATCATACCCA TATTGATGGT GTGATTTTTA ATGCTGCATT GTTCCATGGG
TTACGTAACG TGACCTCTAT GCCTATTTCG GATCTTGATG CTTCATATCG AGTAAATCTT
AGAGCTAATG TTTTATTAAC AAACGTATTA TTACCATTAA TACGTCTTAG TAAAGGGCGA
TTACTTTATA CGTCATCAAT TGTTGGGCAT GAAGCGTGGC CAGGTTGGAG CGATTACTGT
ATCACTAAGT TTGCGTTAGA AAGTTATAGT CAATTAGTTG CAATAGAAAA TAAAAATGAG
TTATTTGTTA ATTGTATAGA CCCCGGTAAG CTTCGTACTG AAATGAGAGT AAAAGCGTTT
CCTAATGAAG ATCCTATGAG TTTACCTACG CCAGAAGAAT TAATGCCTCT TTATGTCGAT
TTAATGTCTA TAAGTTCTCT TCATGGACAG GTAATTGATG GCCGAGATTA TCTAAAATAA
 
Protein sequence
MKNKLSNKTI LITGASRGLG KTIALALGEQ GAELILHARK MEQLLELKST FLTLGYKEPT 
LVILDLLDAE PQDYEALGRS IKLNHTHIDG VIFNAALFHG LRNVTSMPIS DLDASYRVNL
RANVLLTNVL LPLIRLSKGR LLYTSSIVGH EAWPGWSDYC ITKFALESYS QLVAIENKNE
LFVNCIDPGK LRTEMRVKAF PNEDPMSLPT PEELMPLYVD LMSISSLHGQ VIDGRDYLK