| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0966 |
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| Symbol | |
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| ID | 6962518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1056777 |
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| End bp | 1057595 |
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| Gene Length | 819 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643382224 |
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| Product | mechanosensitive ion channel |
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| Protein accession | YP_002265255 |
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| Protein GI | 209809716 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.247343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTTATTGG CGCACAAAAT GGTATTTAGT GTTCTTATCA TCAGCCTTGT TTTACTTGTG
CGTCATTTTT CGGTTAAACG GATCCGTGGT GATATTGCTT TCTTAACGGA AGATCAGCGT
AAATGGATAT CACGCACGAA AAACGGCTCA TTCAGCTTTA TTGTTATTAT CTTATTCATT
TTATGGAAGT CAGAAATAAA TGAATTTGCC TTATCGGTAA CCGCGATAGC TGTGGCGATA
GTGGTGGCAT CTAAAGAAAT CATTCTATGT TTTACGGGAT CGATTCAGCG AGCAAGTTCT
CGCTCTTTTA GAATTGGTGA TTGGATAGAA GTCGGAACAT TGTGTGGGGA AGTTATCGAG
CACAATATGA TGGCGACAGT AATACAAGAA ATCGATTTAC ACCACGGACA GTATAATTAC
ACTGGAAAAA CCGCGACCTT ACCTAACAGT ATGTTCTTCA CTTACCCCGT TAAAAATCTT
AATTTCATGA AGCGTTATGT TTATCATCAG TTTTCTATTT GTGTGCGAGA TTTTGTTAAT
TTATACCCAA CCTTGCCCGG TTTATTAGAA AAAATAGATA CGCACTGTGA AGAGTTTATT
GAGGTAGCTC GACGCTATAA TGGCGTGATT GAAAAGCATG CGGGGGTTGA TTTACCTGGC
TCTGAGCCAC ATATACATAT TTCTAGCACA TCGACAGGGG AGCAAAAAGT GTATTACGTT
ATTTTCTGTC CAACCGAAAA AGCGTCTCAT TTAGAACAAC TTATTCGCCA AGATTTTATG
GAGATGTATG AAAAGACGTT TCCTAAAATA GAAGACTAG
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| Protein sequence | MVFSVLIISL VLLVRHFSVK RIRGDIAFLT EDQRKWISRT KNGSFSFIVI ILFILWKSEI
NEFALSVTAI AVAIVVASKE IILCFTGSIQ RASSRSFRIG DWIEVGTLCG EVIEHNMMAT
VIQEIDLHHG QYNYTGKTAT LPNSMFFTYP VKNLNFMKRY VYHQFSICVR DFVNLYPTLP
GLLEKIDTHC EEFIEVARRY NGVIEKHAGV DLPGSEPHIH ISSTSTGEQK VYYVIFCPTE
KASHLEQLIR QDFMEMYEKT FPKIED
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