| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0957 |
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| Symbol | luxI |
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| ID | 6962278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1047262 |
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| End bp | 1047843 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643382215 |
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| Product | autoinducer synthesis protein LuxI |
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| Protein accession | YP_002265246 |
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| Protein GI | 209809707 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.375651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATAA TGATAAGAAA ATCCGAGTTT ACTACTATTC CTATGCATGA ATACAATGGA
ATACTTAGTC TACGTTATCA AGTGTTTAAA CAAAGATTAC AATGGGACTT ACTTTCAGAA
AATGATCTTG AATCCGATCA ATATGATAAC TCTGAAGCGG CATATATATA CGCTTGTGAT
GATGCTGAAA AGGTAAATGG ATGCTGGCGT TTAATACCAA CGACAGGTGA TTATATGTTG
AAAACAGTAT TCCCTGAATT ACTTGGTGAT CAAGCTGCGC CAAACGATCC TAGCGTTGTG
GAATTAAGTC GTTTTGCTGT TGGAAAACAT AGTTCAAAAA TGAATGAGTC AGCAAGCGAA
ATCACAATGA AGCTTTTTGA AGCGATCTAT ATACACGCAA TAAGCCATGG AATTACTGAA
TATGTAACAG TTACATCGAC AGCAATTGAG CGTTTTTTAA AGCGAATTAA AGTGCCTTGT
CACCGTATTG GCGATGAACA AGTACATCTA TTAGGTGAAA CAAAATCGGT CGTTTTATCA
ATGCCGATTA ATGAACAATT TAAAAAGGCT GTATTAATAT AA
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| Protein sequence | MTIMIRKSEF TTIPMHEYNG ILSLRYQVFK QRLQWDLLSE NDLESDQYDN SEAAYIYACD
DAEKVNGCWR LIPTTGDYML KTVFPELLGD QAAPNDPSVV ELSRFAVGKH SSKMNESASE
ITMKLFEAIY IHAISHGITE YVTVTSTAIE RFLKRIKVPC HRIGDEQVHL LGETKSVVLS
MPINEQFKKA VLI
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