| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0950 |
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| Symbol | |
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| ID | 6962272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1038577 |
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| End bp | 1040007 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643382209 |
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| Product | putative membrane associated signaling protein |
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| Protein accession | YP_002265240 |
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| Protein GI | 209809701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0172619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TTATTAATAA ATATATAGTT GGCGTTATTG TTATATTTAT CTTGTTTGAA
TGTGCTATCT GTGTCGATTA TCAGCAATAT GTTGAATCAA ACATTAAAAA CACGGTTAAA
AATATTGAGT TGAAGTTTGA TAAAGCAAAA GTGTCAATAG ATGAACTCAC TCACCTTAAA
GATCAGACGT GCCAAGAGAT GATGTTACCT TTGCAAAAGA TAGTGGCATT AAGTCCTACG
ATAAATAGCA TTTCTATTAT TCGAAATGGT CAATATTATT GTAGCTCAAT TGTGGGAATG
AATATCTCAA AAAAAGCAGT TCCAGAAAAA GAAATTAATA TAAAAGAAAA AGATTCATTA
ACCGGACTAC CTGCAATTTC TTATTATCAT CGTTATGATG AGGCCAATGG CATTCAGTTT
TTCATGAAAG GCATTCCTTT TGACTTAGAA GAAAGCCGAG TGGGGAACGT CATTTTATCC
AATCAAGAAT ACACGATATC AAAAGAGAAT CAGTTTGGAT TGCACAAAGC CAATGAGGAA
GATAATTACC CATCGGCAAA GTATGACTTC TTAATTTTAC TTAAGTACGA TGCGGCGTCT
TCAGTGAAGA ATTATTTGAT AGATAATAGG CTGGTGATTG TTATTTCATT GCTCGTGATG
GCATTACTAA AAGCGTTGTC AGTAAAAAGT ACGCTGTTTA ATCTGGATTT TTTTACGTTA
AGAAAAGCGA TAAAACACAA TCATATAAAG CCATTTGTGC AACCGATAGT AAATGAAAAA
GAACACATTA TCGGGGGAGA AGTGCTTGCT CGTTGGATAA CCGAAAAAGG GGGGATAATC
TCACCGCTTG AGTTTATTCC TAAAATTGAA AAATTTGGTT TGATGAATGC GATGACAAAA
TCGTTGTTAA GTCAATTAAT TGAGTGTTAT CAAAACAGCC CGAAAAGCGA GTTAAGGATC
AGTGTTAATT TAACGGAAAA TTGCTTATAT GATGATGAGA TATTTCTTCT GTGCAAACAG
CTGTGTGACA AGTTTATATT GGTATTAGAG TTCACAGAAT CGACTGAGTT TGAAGACAGA
CAAAAAATCA TCTCATACAT GCAAAAATTC AGAGCGGTAG GGGTGAAGTT TGCGTTAGAT
GATTATGGAA CGGGCTACTC ATCATTGCAG TATTTGAATT ATTACCAATT TGATTTTGTG
AAAATTGATA AATCATTTAT TGATGATATT GAAACAAACA AACAGTCCCT AAAAATAGTA
GAGAACATCA TTTTACTGGC GAATAATTTG AACATAAATC TGGTGGCGGA AGGGGTAGAA
AACAAGAATC AGAAACAGAT CCTGAATGAT TTGAACATCT CATCGCATCA AGGCTTCTTG
TACTTTAAAC CGATGCCACT CAATGAGTTT TATTCAAAAG TAAAACGATA A
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| Protein sequence | MKFIINKYIV GVIVIFILFE CAICVDYQQY VESNIKNTVK NIELKFDKAK VSIDELTHLK
DQTCQEMMLP LQKIVALSPT INSISIIRNG QYYCSSIVGM NISKKAVPEK EINIKEKDSL
TGLPAISYYH RYDEANGIQF FMKGIPFDLE ESRVGNVILS NQEYTISKEN QFGLHKANEE
DNYPSAKYDF LILLKYDAAS SVKNYLIDNR LVIVISLLVM ALLKALSVKS TLFNLDFFTL
RKAIKHNHIK PFVQPIVNEK EHIIGGEVLA RWITEKGGII SPLEFIPKIE KFGLMNAMTK
SLLSQLIECY QNSPKSELRI SVNLTENCLY DDEIFLLCKQ LCDKFILVLE FTESTEFEDR
QKIISYMQKF RAVGVKFALD DYGTGYSSLQ YLNYYQFDFV KIDKSFIDDI ETNKQSLKIV
ENIILLANNL NINLVAEGVE NKNQKQILND LNISSHQGFL YFKPMPLNEF YSKVKR
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