| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0921 |
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| Symbol | |
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| ID | 6962523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1006668 |
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| End bp | 1007636 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382185 |
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| Product | putative GGDEF protein |
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| Protein accession | YP_002265216 |
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| Protein GI | 209809677 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGA AAAATACAGC AATGAATGAC TTTCATTGGG CAATGCAAGT CATTGGAGAT
TTAGACGCTG GCTTAATCGT ATTAGATAAA GAATATCGAG TATGCGCTTG GAATTCTTTT
ATGCAATCTT ACAGTGGCGT CACTGCTGAT TCGATTCTTG GTCACGTTAT TTTTGACATC
ATTCCTGATT TGCCAGCCTC TTGGCTTAGA AAAAAAGTAG ATGCATCTTT TAGTCTAAAA
ACTAGAGGCT TTTCATCTTG GGAAGACCGT CCTTATTTAT TCAAATTTAA AAACTTTACC
CCTATCTCTA GCGGCTTGAC TGAAATGCGT CAGAACATTA CTTTCTCACC ACTGACTTCG
TTAAATGGAC TCGCTTCACA CGTCAGTTTG GTTATTAATG ATGTTACAGA CATAGCCAAA
AACAAGCTTC ACTTACAAGA GTCAAATCAA CAACTCTCTA ACCTAAGTAA AACAGATGGA
TTAACAAACC TATTTAATAG GGCTTATTGG GAGTCTTGTT TGAAGAAAGA ATTTGAGACG
GCACAAGTGT CTGGCGCCGT ATCATCAATC GTCATTTTTG ACATCGATCA CTTCAAGCAA
GTAAATGACA CTTATGGACA CACTGTGGGT GATGACGTCA TCCGAAACGC ATCAGATCTA
CTTCGAAAAA CATCACGTAA CACCGACATT TGTGGTCGTT ATGGAGGGGA GGAATTTACC
GTTATTCTTC CAGGTACCAA TGCAGAACAA GCATTGTATT TCACAGAAAG GCTCCGCAAG
CGCATAGAGA AAGCGGTTGT AGTTTGTGAA AAAGCAAACG TTAGTTACCA AGTTAGCCTG
GGTGTATGTG AATTAGCTCC TGAACATACT GATTATTTAT CTTGGTTAGA AATGGCCGAT
AAAGCACTTT ATCACTCAAA AGAAAATGGA CGAAATAGGT CAACGGTTTA TCATCCTGAC
CTAGCCTAA
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| Protein sequence | MNTKNTAMND FHWAMQVIGD LDAGLIVLDK EYRVCAWNSF MQSYSGVTAD SILGHVIFDI
IPDLPASWLR KKVDASFSLK TRGFSSWEDR PYLFKFKNFT PISSGLTEMR QNITFSPLTS
LNGLASHVSL VINDVTDIAK NKLHLQESNQ QLSNLSKTDG LTNLFNRAYW ESCLKKEFET
AQVSGAVSSI VIFDIDHFKQ VNDTYGHTVG DDVIRNASDL LRKTSRNTDI CGRYGGEEFT
VILPGTNAEQ ALYFTERLRK RIEKAVVVCE KANVSYQVSL GVCELAPEHT DYLSWLEMAD
KALYHSKENG RNRSTVYHPD LA
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