Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0903 |
Symbol | exbB3 |
ID | 6962460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 986979 |
End bp | 987512 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643382169 |
Product | TonB system transport protein ExbB3 |
Protein accession | YP_002265200 |
Protein GI | 209809661 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGT CATGGCTATC TAATTGGCTT GATACGTTAC TGCAATTTAT GGCACAAGGC GGTCATATCT TGTGGTGGCT GGCAGGGGTT GTGGTTGTAT GTTGGTTATT TGTGGTTGAG CGCGTGATAT ATCTTGGTTT TTATTTTCCA AAGCACCGCC AGCAATGGGT AACACAATGG CATCAACGCC ATGAGCATGA ATCTTGGTAT GCTCATGCGA TTCGTGACAG TTGGTTAAAT CAGGCCCACA TAGAATTAAA TCAGAACTTA AACCTAATCA AATGGCTAGT ATCAATTTGT CCAATGTTAG GATTATTAGG CACTGTGACT GGAATGATCT CTGTTTTTGA TGTGATGGCG ACATTAGGCA GTAGCCAACC GAAACTGATG GCCTCAGGCA TCTCATTGGC TACGCTACCA ACGATGGCGG GTATGGTTGC CGCCCTTGCT GGATTATTTG TTCATGCACG TTTAGCAAAG ACGTGTCGTT TACGTGAATT GAAGTTAGAA AAATCATTAA GGAGTCCAAC ATGA
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Protein sequence | MAMSWLSNWL DTLLQFMAQG GHILWWLAGV VVVCWLFVVE RVIYLGFYFP KHRQQWVTQW HQRHEHESWY AHAIRDSWLN QAHIELNQNL NLIKWLVSIC PMLGLLGTVT GMISVFDVMA TLGSSQPKLM ASGISLATLP TMAGMVAALA GLFVHARLAK TCRLRELKLE KSLRSPT
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