Gene VSAL_II0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0903 
SymbolexbB3 
ID6962460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp986979 
End bp987512 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID643382169 
ProductTonB system transport protein ExbB3 
Protein accessionYP_002265200 
Protein GI209809661 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGT CATGGCTATC TAATTGGCTT GATACGTTAC TGCAATTTAT GGCACAAGGC 
GGTCATATCT TGTGGTGGCT GGCAGGGGTT GTGGTTGTAT GTTGGTTATT TGTGGTTGAG
CGCGTGATAT ATCTTGGTTT TTATTTTCCA AAGCACCGCC AGCAATGGGT AACACAATGG
CATCAACGCC ATGAGCATGA ATCTTGGTAT GCTCATGCGA TTCGTGACAG TTGGTTAAAT
CAGGCCCACA TAGAATTAAA TCAGAACTTA AACCTAATCA AATGGCTAGT ATCAATTTGT
CCAATGTTAG GATTATTAGG CACTGTGACT GGAATGATCT CTGTTTTTGA TGTGATGGCG
ACATTAGGCA GTAGCCAACC GAAACTGATG GCCTCAGGCA TCTCATTGGC TACGCTACCA
ACGATGGCGG GTATGGTTGC CGCCCTTGCT GGATTATTTG TTCATGCACG TTTAGCAAAG
ACGTGTCGTT TACGTGAATT GAAGTTAGAA AAATCATTAA GGAGTCCAAC ATGA
 
Protein sequence
MAMSWLSNWL DTLLQFMAQG GHILWWLAGV VVVCWLFVVE RVIYLGFYFP KHRQQWVTQW 
HQRHEHESWY AHAIRDSWLN QAHIELNQNL NLIKWLVSIC PMLGLLGTVT GMISVFDVMA
TLGSSQPKLM ASGISLATLP TMAGMVAALA GLFVHARLAK TCRLRELKLE KSLRSPT