| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0902 |
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| Symbol | exbD3 |
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| ID | 6962609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 986578 |
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| End bp | 986982 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643382168 |
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| Product | TonB system transport protein ExbD3 |
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| Protein accession | YP_002265199 |
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| Protein GI | 209809660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTCG GAAGACGCGA TACAAAAACA GAAGAAGCCC AAATTGATTT AACCTCAATG
TTGGATATTG TCTTTATTAT GCTGATATTT TTCATTGTGA CGAGCTCATT TGTGCGTGAA
TCAGGGGTTG AAGTGAATCG GCCTCAAGCA TCAAATGTGA CGAGCCAGAA AGACGCGGGC
ATCTTTGTTG GCATTAACGC ATCAAATGAT ATTTACATCG ATAAACGAAT CGTAGATGTA
GAGCGTGTGC AAGCGACGTT AGAGCATCTG TTATTAGAGC AACCTGATGC CTCTCTTGTG
ATCCAAGCGG ATGAACATGC GTATAACGGC ACCGTAGTTA AAGTGATGGA TGCAGCAAAA
GGCGCGGGCG TGAAGCAAAT TGCATTGGCT GCGGAGAAAA GATAG
|
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| Protein sequence | MRLGRRDTKT EEAQIDLTSM LDIVFIMLIF FIVTSSFVRE SGVEVNRPQA SNVTSQKDAG
IFVGINASND IYIDKRIVDV ERVQATLEHL LLEQPDASLV IQADEHAYNG TVVKVMDAAK
GAGVKQIALA AEKR
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