| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0894 |
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| Symbol | |
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| ID | 6962231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 976824 |
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| End bp | 978725 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382162 |
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| Product | PTS system, IIBC component |
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| Protein accession | YP_002265193 |
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| Protein GI | 209809654 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.207234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACAG ACTTAATCAA TGAACAATTA ATTTGTTTAA ATTTACACGC AAAAACCAAA
GACGATGTAT TTTCTGAAAT GGCTGCGATA CTTCATCAGC AAGGTCGAAT TAATGATATA
GGCCAGTTTT TATCTGATAT TTACGCCCGT GAAGAACTAG GAAATACGGG CTTTGAAGAA
GGTGTTGCTC TTCCTCATGC AAAAAGTTCA GCTGTAATTA AACCTGCCGT AATGATTGGT
GTAAGCCAAG AAGGTGTTGA ATACGGAGCA GAAGATGGGC AGCCATCTCG CTTATTTTTT
ATGATCGCCT CACCTGAAAA TGGAGCTGAT CATCATATTG AAGTTCTTGC AGAACTCTCT
TCAAAACTGA TTGAAGAAGG GTTTATCAAA AAATTTCTTA ATGCGACCTC TTCTAAATTA
GCGCTTGAAT TATTGCTACA AAAAGCAGAA ACCATTGATG CAATAGAACC TAAAAATGGA
TTTTTAATTG GAGTCACAGG TTGTCCTGCC GGTATTGCTC ATACCTATTT AGCGTGCGAG
GCCCTTGAAA AAGGCGCAGC AGAATTAGGA TATAAGATAA AAGTAGAAAC CAACGGGTCT
ATTGGGGTCA GAAATAGCCC AACAGCAGAA GAAATAGAAC AAGCCGATGC CATTATTATT
GCTTGTGATA AACAAGTAGA CCTCACTCAT TTTGCAGGAA AAAAACTGAT TCAAACCAGT
GTTAAGGCTC CGATCAAAGA CGCAAAAGGA CTGATCACTC AGTCTCTAAC TCAACCACCT
TTTGATACTG ACAGTGTAAA TACACCAACA GATACCAAAG ACAAAACCTC TCAAGCACGT
TCAGATTTAT ACCGTTACCT AATGAACGGC GTATCCCACA TGATCCCATT TGTGGTTACG
GGCGGTTTGT TAATCGCATT AGCATTAGCG CTTGGTGGTC AACCTACTGA GAGTGGTATG
GCTATTCCTC CCGGTAGTTT GTGGAATAAA GTATTAGATG TTGGTGTTGT TGCTTTCACC
TTAATGATCC CCGTTCTTGC AGGTTACATT GCTTATGCGA TTGCAGATCG CCCAGCACTA
ACTCCAGGTC TTATTGGTGG TTGGATTGCA AACAACGGTT CTTTTTATGG TGCAGATGCA
GGTACTGGCT TTATTGGTGC CATCATTGCC GGTCTTCTTG TTGGTTACTT CGTCAAATTT
ATCGTGAGCG TTAACTACCA TAAATTTATC CAACCCCTTG TTCCTATCAT GATTGCCCCT
ATTGCCGGTT CATTGTTCAT TTCTGGATTA TTCATTTTTG TTATTGGTGC ACCAATAGCA
AGTTTAATGG ATGGATTAAC CGCACTACTA ACAAGCATGA GCTCTGGTAA CGTGATTTTA
TTAGGCATCG TACTGGGTGG AATGACGGGC TTTGATATGG GTGGCCCATT CAATAAAGTC
GCCTTCTTAT TCTCTGTTGG CATGATTGCG AGTGGTCAAA CTCAATTCAT GGGCGCCATG
GCATGTGCTA TTCCTGTCGC ACCACTTGGC ATGTCGTTAG CTACCATCAT TGGTCGTAAA
TTCAATATCT TTGAAGAATC AGAAATTGAA GCAGGCAAAG CAGCTGGTGC AATGGGTTTA
GTTGGTATTT CTGAAGGTGC AATTCCATTT GCAGCTCAAG ATCCTATCTC TGTGATCCCA
GCGAATATCC TTGGTTCGAT GACGGCCGCA GTAATGGCTT TCTCATTTGG TATCACAAAC
AGTGTTGCTC ATGGTGGTCC CGTTGTCGCC CTACTTGGCG CGATAAATAA ACCATTACTT
GCACTTGCTT GTATGGCTGG CGGCGCAGTT GTAACTGCAC TTGTTTGCGT ATCCATTAAA
AAGATGCGTC AAGCGAAAGC CCTGTCTCTA GCGGCAATTT AA
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| Protein sequence | MITDLINEQL ICLNLHAKTK DDVFSEMAAI LHQQGRINDI GQFLSDIYAR EELGNTGFEE
GVALPHAKSS AVIKPAVMIG VSQEGVEYGA EDGQPSRLFF MIASPENGAD HHIEVLAELS
SKLIEEGFIK KFLNATSSKL ALELLLQKAE TIDAIEPKNG FLIGVTGCPA GIAHTYLACE
ALEKGAAELG YKIKVETNGS IGVRNSPTAE EIEQADAIII ACDKQVDLTH FAGKKLIQTS
VKAPIKDAKG LITQSLTQPP FDTDSVNTPT DTKDKTSQAR SDLYRYLMNG VSHMIPFVVT
GGLLIALALA LGGQPTESGM AIPPGSLWNK VLDVGVVAFT LMIPVLAGYI AYAIADRPAL
TPGLIGGWIA NNGSFYGADA GTGFIGAIIA GLLVGYFVKF IVSVNYHKFI QPLVPIMIAP
IAGSLFISGL FIFVIGAPIA SLMDGLTALL TSMSSGNVIL LGIVLGGMTG FDMGGPFNKV
AFLFSVGMIA SGQTQFMGAM ACAIPVAPLG MSLATIIGRK FNIFEESEIE AGKAAGAMGL
VGISEGAIPF AAQDPISVIP ANILGSMTAA VMAFSFGITN SVAHGGPVVA LLGAINKPLL
ALACMAGGAV VTALVCVSIK KMRQAKALSL AAI
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