| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0889 |
|---|
| Symbol | |
|---|
| ID | 6962226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 973944 |
|---|
| End bp | 974546 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643382157 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002265188 |
|---|
| Protein GI | 209809649 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.581973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTTG AAACGGCTAG GTTAACACCA CAAGAAAATT ATAAGTTGTT AATCGGAGGG
ATCTTACCTC GGCCAATTGC TTGGGTTTCA AGCATTTCAT CGTCAGGAGA GGTGAATTTA
GCGCCGTTCT CATTCTTTAC TGTGGCGAGT GCCAACCCCC CAATTCTTTG TTTCAATCCT
ATGTATAACC AAGATGCGGA AGCTAAAGAT ACGTTGAGAA ATATTCGAGA ACAGGGTGAG
TTTGTCATTA ATACGGTCAG TGCTACACAT TTAGAGGTGA TGAATAAAAC CTGTCATGGT
TTAGCCCATG ATATTGATGA ATTTGAGTAC GCAGGGATTA AAAAGGCACA ATCAGATTTT
GTTACTCCTC CACGGGTTGC TAATGCGATT GTGAGTTTTG AATGCCGATT AAACCAAATT
GTTGATCTTG GTGATGATGT TTTATCAGGG CATTTAATTT TAGGTGATGT TATTGCAGTG
CATGTTGCGG ATGAAGCGGT TTATGATGGC AAGATTGACA GTGATAAATT AGATGCGATA
GCACGAATGT CTGGAGCCGA TTACAGCTTA ACAAGAGAAC GGGTTCAATT ATCTCGTTCA
TGA
|
|---|
| Protein sequence | MRFETARLTP QENYKLLIGG ILPRPIAWVS SISSSGEVNL APFSFFTVAS ANPPILCFNP
MYNQDAEAKD TLRNIREQGE FVINTVSATH LEVMNKTCHG LAHDIDEFEY AGIKKAQSDF
VTPPRVANAI VSFECRLNQI VDLGDDVLSG HLILGDVIAV HVADEAVYDG KIDSDKLDAI
ARMSGADYSL TRERVQLSRS
|
|---|
| |