Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0881 |
Symbol | |
ID | 6962440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 965846 |
End bp | 967030 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643382149 |
Product | drug resistance translocator protein |
Protein accession | YP_002265180 |
Protein GI | 209809641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0515514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTAT TTAATACAAC CGATTTTAAG AAAACCCCTT TATTTCTCGC AATGATGATC ATTGCAACAG GTCAAGTAGG GGTGAGTATT TATTTGCCAT CATTGCCCTT AATCAGCCAC GATTTAGGTG TTTCTTCCGC TGATGTGCAA TTACTTGTTA CGCTATTTTT AGTGGGCTTT GGCGTGTCCC AATTATTCTA TGGACCCGTG TCTGATGCGA TTGGACGTCG GCCTATCTTT ATTTTAGGTC AAGGGATTTA TTTATTAGGC ACTCTTTTGT GTGTATCTAT GACGGATAAT TTTACTGCAT TAGTGTTAGG GCGTTTACTG CAAGGTTTAG GCGCGGGGAG TGCCTCAGTA TTAGGACGAA GTGTACTGCG AGACAGCTAC AGCGGCTATC ATTTGACTAA AGCCATGTCG TATATTTCGA TCACGGCATC TATCTTACCA ATATTAGCGC CGGTTATTGG AGGTTGGATA GCATGGCATT TTAGTTGGGA ATGGGTCTTT GGTTTTGTTT TATTGTATCT CATTGGCATT TTAACATTAG GGTATTTTAT TCTTCCTGAA ACTCTGCCTT ATAAACCAAA AAAATTCAGC TTAGCTCAAA CATTACGGGA TTACGGTGCT TTATTTCGTA ATGCTCAGGT GATCTCTAGT GCCAGTTTTA ATTGGATCAG TTATTTAGCT AGCTTAGTCT CTGTATCATT ATTGCCTTTT TTATTACAGG GTGATTTAGG GTTAACGACG GCTGAGTATG GCGAGATAAT GATCATCCCT TCGGCTGGGT TAATGATGGG CAGTTTTATT CTGAACAGTC TAAATAAAAA GTGGTCAATT AATCAGCTAA TATGTCTTGC TCTCGTCATC ATGTCAATTT CTGGTATATG GTTGGTTGTT TTTACTACGT CTCTATTTTC GTTAATATTT GGGTTTACAT TATTAGCGGT TTCACAAGGG ATCATCTTTC CATTGTCGAT TACTTTACTA TTGTCACCAC ACACTAAAAA CGTAGGCACT ATTTCTGCGT TATCTGGTTC TATCCAAATG TGTTTATCAG GTATTCTTGG TGGCTATTTA GTTAAGCATT GGGTTGTAGA TCAAAACAGT TTAGGTGTCT TTTATTTATT GATTGCCTCT ATGATGTTGT GTGTATTGTT TTGGAATAGG AAAGTTAGGC TATAA
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Protein sequence | MTLFNTTDFK KTPLFLAMMI IATGQVGVSI YLPSLPLISH DLGVSSADVQ LLVTLFLVGF GVSQLFYGPV SDAIGRRPIF ILGQGIYLLG TLLCVSMTDN FTALVLGRLL QGLGAGSASV LGRSVLRDSY SGYHLTKAMS YISITASILP ILAPVIGGWI AWHFSWEWVF GFVLLYLIGI LTLGYFILPE TLPYKPKKFS LAQTLRDYGA LFRNAQVISS ASFNWISYLA SLVSVSLLPF LLQGDLGLTT AEYGEIMIIP SAGLMMGSFI LNSLNKKWSI NQLICLALVI MSISGIWLVV FTTSLFSLIF GFTLLAVSQG IIFPLSITLL LSPHTKNVGT ISALSGSIQM CLSGILGGYL VKHWVVDQNS LGVFYLLIAS MMLCVLFWNR KVRL
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